PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G13300.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

CAMTA

Protein Properties

Length: 994aa MW: 110661 Da PI: 7.5165

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G13300.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166.6	4.1e-52	95	210	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 e +rw +++ei+aiL+n++++++++++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdg+tv+E+hekLK+g+ e +++yYa++e++p+f ONIVA07G13300.1 95 AEaAARWFRPNEIYAILANHARFKIHAQPVDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGRTVQEAHEKLKIGNEERVHVYYARGEDDPNFF 188 45589*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylev 117 rrcywlL+++le+ivlvhy+++ ONIVA07G13300.1 189 RRCYWLLDKDLERIVLVHYRQT 210 *****************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 994 aa Download sequence
MEQLKDLLHR SADAAKYAAT QPPPTPPLTG VSHNILTLLS PLHLQSSSLS SSARAAAAEA 60 EAAAMAGAGG WDPLVGSEIH GFLTYPDLNY EKLVAEAAAR WFRPNEIYAI LANHARFKIH 120 AQPVDKPVSG TVVLYDRKVV RNFRKDGHNW KKKKDGRTVQ EAHEKLKIGN EERVHVYYAR 180 GEDDPNFFRR CYWLLDKDLE RIVLVHYRQT AEENAMAPPN PEPEVADVPT VNLIHYTSPL 240 TSADSTSGHT ELSLPEEINS HGGISASSET GNHDSSLEEF WANLLESSIK NDPKVVTSAC 300 GGSFVSSQQI NNGPKNSGNI VNTSMASNAI PALNVVSETY ATNHGLNQVN ANHFGALKHQ 360 GDQTQSLLAS DVDSQSDQFI SSSVKSPMDG NTSIPNEVPA RQNSLGLWKY LDDDSPGLGD 420 NPSSVPQSFC PVTNERLLEI NEISPEWAYS TETTKVVVIG NFYEQYKHLA GSAMFGVFGD 480 QCVAGDIVQT GVYRFMVGPH TPGKVDFYLT LDGKTPISEI CSFTYHVMHG SSLEARLPPS 540 EDDYKRTNLQ MQMRLARLLF ATNKKKIAPK LLVEGTKVAN LMSALPEKEW MDLWNILSDP 600 EGTYVPVTES LLELVLRNRL QEWLVEMVME GHKSTGRDDL GQGAIHLCSF LGYTWAIRLF 660 SLSGFSLDFR DSSGWTALHW AAYHGRERMV ATLLSAGANP SLVTDPTPES PAGLTAADLA 720 ARQGYDGLAA YLAEKGLTAH FEAMSLSKDT EQSPSKTRLT KLQSEKFEHL SEQELCLKES 780 LAAYRNAADA ASNIQAALRE RTLKLQTKAI QLANPEIEAS EIVAAMKIQH AFRNYNRKKA 840 MRAAARIQSH FRTWKMRRNF INMRRQVIRI QAAYRGHQVR RQYRKVIWSV GIVEKAILRW 900 RKKRKGLRGI ASGMPVVMTV DAEAEPASTA EEDFFQAGRQ QAEDRFNRSV VRVQALFRSY 960 KAQQEYRRMK IAHEEAKDHN NNHCTTINVR NGFD

Sequence ? help Back to Top

Protein Sequence Length: 994 aa Download sequence

MEQLKDLLHR SADAAKYAAT QPPPTPPLTG VSHNILTLLS PLHLQSSSLS SSARAAAAEA  60
EAAAMAGAGG WDPLVGSEIH GFLTYPDLNY EKLVAEAAAR WFRPNEIYAI LANHARFKIH  120
AQPVDKPVSG TVVLYDRKVV RNFRKDGHNW KKKKDGRTVQ EAHEKLKIGN EERVHVYYAR  180
GEDDPNFFRR CYWLLDKDLE RIVLVHYRQT AEENAMAPPN PEPEVADVPT VNLIHYTSPL  240
TSADSTSGHT ELSLPEEINS HGGISASSET GNHDSSLEEF WANLLESSIK NDPKVVTSAC  300
GGSFVSSQQI NNGPKNSGNI VNTSMASNAI PALNVVSETY ATNHGLNQVN ANHFGALKHQ  360
GDQTQSLLAS DVDSQSDQFI SSSVKSPMDG NTSIPNEVPA RQNSLGLWKY LDDDSPGLGD  420
NPSSVPQSFC PVTNERLLEI NEISPEWAYS TETTKVVVIG NFYEQYKHLA GSAMFGVFGD  480
QCVAGDIVQT GVYRFMVGPH TPGKVDFYLT LDGKTPISEI CSFTYHVMHG SSLEARLPPS  540
EDDYKRTNLQ MQMRLARLLF ATNKKKIAPK LLVEGTKVAN LMSALPEKEW MDLWNILSDP  600
EGTYVPVTES LLELVLRNRL QEWLVEMVME GHKSTGRDDL GQGAIHLCSF LGYTWAIRLF  660
SLSGFSLDFR DSSGWTALHW AAYHGRERMV ATLLSAGANP SLVTDPTPES PAGLTAADLA  720
ARQGYDGLAA YLAEKGLTAH FEAMSLSKDT EQSPSKTRLT KLQSEKFEHL SEQELCLKES  780
LAAYRNAADA ASNIQAALRE RTLKLQTKAI QLANPEIEAS EIVAAMKIQH AFRNYNRKKA  840
MRAAARIQSH FRTWKMRRNF INMRRQVIRI QAAYRGHQVR RQYRKVIWSV GIVEKAILRW  900
RKKRKGLRGI ASGMPVVMTV DAEAEPASTA EEDFFQAGRQ QAEDRFNRSV VRVQALFRSY  960
KAQQEYRRMK IAHEEAKDHN NNHCTTINVR NGFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G13300.1