PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G11690.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

GRF

Protein Properties

Length: 269aa MW: 28001 Da PI: 4.4802

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G11690.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	73.8	1.9e-23	180	224	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++epgrCrRtDGKkWRC+r++++++k+CErH+hrgr+r + ++e ONIVA07G11690.1 180 EPEPGRCRRTDGKKWRCWRNAIANEKYCERHMHRGRKRPVQLVVE 224 69************************************9998875 PP
2	QLQ	54.3	4.2e-19	114	149	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 aFTa+Qlq+L++Q +y+y+aa++PvP +L+++i+k ONIVA07G11690.1 114 AFTAMQLQELEQQSRVYQYMAARVPVPTHLVFPIWK 149 8*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MAAEGEAKKD SASNPPGGGG GGGGGEEEED SSLAVGEAAV GVGEAGGGGG GGEKADREEE 60 EGKEDVEEGG VCKDLVLVED AVPVEDPEEA AATAALQEEM KALVESVPVG AGAAFTAMQL 120 QELEQQSRVY QYMAARVPVP THLVFPIWKS VTGASSEGAQ KYPTLMGLAT LCLDFGKNPE 180 PEPGRCRRTD GKKWRCWRNA IANEKYCERH MHRGRKRPVQ LVVEDDEPDS TSGSKPASGK 240 ATEGGKKTDD KSSSSKKLAV AAPAAVEST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-29	GRF family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G11690.1