PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA07G09500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 25357.1 Da PI: 9.8115 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54 | 4.3e-17 | 77 | 126 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrd + ng +r+++g+f++ae Aa a+++a+++ +g ONIVA07G09500.1 77 FIGVRRRP-WGRFAAEIRDSTRNG--ARVWIGTFDSAEAAAMAYDQAALSARG 126 57******.**********44465..***********************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MAEHFSHAGM YIGYTADAAA SSSSSSSSSS SSSSEMLRFD TGWPDETPAP SSVAGRRRSA 60 GGDHRQGRGQ TEAAAAFIGV RRRPWGRFAA EIRDSTRNGA RVWIGTFDSA EAAAMAYDQA 120 ALSARGAAAA LNFPVERVRE SLHALSLGAA GGSPVLALKR RHSKRKRRKK AELLAAAAAT 180 AATANATPQT RRISKSTELT TATTDEQKRF VVELEDLGAE YLEELLWLSE INGGSDPAD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 166 | RRHSKRK |
2 | 164 | 169 | KRKRRK |
3 | 164 | 170 | KRKRRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-22 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA07G09500.1 |