PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA07G08430.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | GRAS | ||||||||
Protein Properties | Length: 175aa MW: 19892.7 Da PI: 8.5183 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 23.2 | 7.4e-08 | 74 | 126 | 36 | 79 |
GRAS 36 dpmqRlaayfteALaarlarsvselykalppsetsekn.........sseela 79 +pm R++ayf++ALa r++r++++++++ +p+e +++ s++ ++ ONIVA07G08430.1 74 TPMPRVVAYFAKALALRVVRMWPHMFEISAPWELTDDAfnsdddafnSDDDAM 126 89*****************************9999776655555555555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MRSPPPLHAD STPARRRGEE MCEMGRVVRW ADKLFWRTME ATVKEHRRGG QRGGQGEEGE 60 AHCVRRDGFT GGPTPMPRVV AYFAKALALR VVRMWPHMFE ISAPWELTDD AFNSDDDAFN 120 SDDDAMALRI LNTITRAKTE TSPGRAKAEE MFVRERMCNG MVAATGVRLP ERRLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63100.1 | 2e-10 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA07G08430.1 |