PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G04120.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family B3
Protein Properties Length: 437aa    MW: 48856.8 Da    PI: 8.632
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G04120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48.3e-16139237198
                      EEEE-..-HHHHT.T-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
               B3   1 ffkvltpsdvlks.grlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                      f+k lt  d+ k+  r+++pk+ a+     +++ +e++ l ++d +g++W ++++++ +   ++l++GW +F++an+L +gD vvF+++  +++
  ONIVA07G04120.1 139 FVKPLTCTDAVKNrYRFIVPKREAAMGvlpQLQLNEHVPLYIKDMHGKEWVINYTWKEYT--HMLSSGWIKFANANRLVTGDNVVFMRSM-DSG 229
                      56666655555554899*******766999555568888***************776665..99***********************765.444 PP

                      ..EEEEE- CS
               B3  91 elvvkvfr 98 
                      e +++++r
  ONIVA07G04120.1 230 ERYMGLRR 237
                      44666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
MDVSHIDRLD HLPPPKASAS AAAAKASPSS SAQAQQFSIT REMWRACAAP KSGRLPAVGS  60
FVYYFPDGHA HQCPSRPPEP LPGRVFLCKV TAVRLDATRN ELFATMSLIP VARDQAIQPQ  120
APADPGPSSP QVQTTLVSFV KPLTCTDAVK NRYRFIVPKR EAAMGVLPQL QLNEHVPLYI  180
KDMHGKEWVI NYTWKEYTHM LSSGWIKFAN ANRLVTGDNV VFMRSMDSGE RYMGLRRTLK  240
PEPVSVDEVI EAVWRAARLE PFEVAYLSRQ DGDEFVVPCG IEDRLPNVGP QGKVIAIENY  300
ATSIWRMIQV EWPSCAGMNR YVNFWQIREV LGESSFEAST CIVRSQDYSP APQRNLVNAL  360
QLPDGTKQLQ QNKKSVSSSS TFRLFGKKMT PGVPPRRDTS GLSGQVSLFS HYLPHDEDDG  420
QVPTMRQRLE TLFPDNI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.11e-26ARF family protein