PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G04100.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARF
Protein Properties Length: 728aa    MW: 79574.1 Da    PI: 7.5149
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G04100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.95.1e-20120232199
                      EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-.......TTHHHHHHHHT--TT-E CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvlt.......kGWkeFvkangLkegDf 79 
                      f+k+l+p+dv++++ lvlp     eh         +++++     ++d++g+++e+ +i++kk++ry+l+       +GW++Fvka++L ++D+
  ONIVA07G04100.1 120 FEKQLSPADVTSNA-LVLPAGA--EHvlppldiaAYQTAR--LFDVRDLRGKRFEFVHIWDKKRCRYMLGdlgvndnDGWRGFVKAKRLATRDT 208
                      99***********9.9999774..5659999887666555..78999*********************************************** PP

                      EEEE....E-SSSEE..EEEEE-S CS
               B3  80 vvFk....ldgrsefelvvkvfrk 99 
                      vvF+     dg+ ++el+v+v+r+
  ONIVA07G04100.1 209 VVFMrrggGDGDGDGELLVGVRRA 232
                      ****7765566799999**99997 PP
2B374.99.6e-24436541199
                      EEEE-..-HHHHT.....T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
               B3   1 ffkvltpsdvlks.....grlvlpkkfaeehggkkeesktltledesgrsWevkliy.....rkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                      f+k+l+psd+ ++     +++v+pk+ a+eh ++ + + +l++++++g +We+ +++     +++s++++l++GW+ Fvka++L++gD+v+F++
  ONIVA07G04100.1 436 FDKKLSPSDAAANgggsgALFVIPKPSAAEHVLP-RIP-DLRVTNLQGGRWEFGHTWsdadtDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMR 527
                      899******999988888899**********776.455.9********************99999999*************************4 PP

                      -SSSEE..EEEEE-S CS
               B3  85 dgrsefelvvkvfrk 99 
                       +r ++e++ +v+rk
  ONIVA07G04100.1 528 -RRPGGEPLAGVRRK 541
                      .34**********98 PP
3Auxin_resp28.75.8e-11255331276
       Auxin_resp   2 ahaastksvFevvYnPrastseFvvkvekvek.alk..vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpn 76 
                      + a++  ++Fev+Y+Pr +t eFvv+++++   +++   ++ +G+ + ++++    ++ ++sGtv+   +l p r  +
  ONIVA07G04100.1 255 WLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGfSFSpfYPFVPGTTVHLRMNPLQIAQ-SISGTVRTFDHLRPWRMLE 331
                      66778889********************9875333344999***********998875.569******9999966555 PP
4Auxin_resp59.51.4e-20558634183
       Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl...sGtvvgvsdldpvrWpnSkWrsLk 83 
                      a+ +as++++F+v+Y+P+++t+eFvv++e+ve +   ++++G+R+++ ++ +d+++r++   +Gtv++v+        +S+Wr+L+
  ONIVA07G04100.1 558 AWLDASSAQPFRVTYCPWQGTAEFVVRREEVEGSP--PLAPGTRVRLLMNPDDARRRSQppvYGTVRDVHS-------RSEWRMLE 634
                      67889*****************************9..*********************9888888888888.......899**995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    
MAQPPDAAAA AAVPPPVVID RDVWHACAVP YSGVLPGVGT LVYYIPHGHI EQCAEDPALL  60
LSRLPDPIHP VPCTVADLVL DVDAESGEAY ATISLLPGSH DDTTARRQVP AHGEPGFRFF  120
EKQLSPADVT SNALVLPAGA EHVLPPLDIA AYQTARLFDV RDLRGKRFEF VHIWDKKRCR  180
YMLGDLGVND NDGWRGFVKA KRLATRDTVV FMRRGGGDGD GDGELLVGVR RAPRARGGHH  240
PRPGVEDNKV VSEVWLAMQG VTPFEVTYYP REGTFEFVVS RDEYIGFSFS PFYPFVPGTT  300
VHLRMNPLQI AQSISGTVRT FDHLRPWRML EVDWDQAASP ISYKIHRQVN SWQVLRQPQP  360
AATTSAVRIR DAIVATPQVQ IMAPPRPPPP TTTTGMVPSD DSYAMISLFP GDCYVTHRPL  420
PAARDPVGGQ REFCFFDKKL SPSDAAANGG GSGALFVIPK PSAAEHVLPR IPDLRVTNLQ  480
GGRWEFGHTW SDADTDRRSS SHTLAAGWSA FVKAKRLCVG DTVIFMRRRP GGEPLAGVRR  540
KPHGGMPVGI PDKHVADAWL DASSAQPFRV TYCPWQGTAE FVVRREEVEG SPPLAPGTRV  600
RLLMNPDDAR RRSQPPVYGT VRDVHSRSEW RMLEVDWDRD SPLAPTMNRR VNSWQVQPVQ  660
LALPPQGSDE EAAAATTSTA HAGDATTSAP SLALQLQTMA SSSSSSAPII PSRGSAFRIV  720
NPRDGSQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.34e-25ARF family protein