PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA07G02150.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NF-YA
Protein Properties Length: 290aa    MW: 31192.9 Da    PI: 9.3464
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA07G02150.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA92.55.1e-29133187358
        CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      p+YVNaKQ+++I++RR +Rak+e+e+++ ++srkpylheSRh+hA+rR+Rg gGrF
  ONIVA07G02150.1 133 PIYVNAKQFNGIIRRRLARAKAEREHRV-SRSRKPYLHESRHRHAMRRARGIGGRF 187
                      9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEDTRILQNH HQQILAAGRQ LQQRHHFPAM PPERHHHPPP PAPGSPAMKF PIISGDSDLG  60
KDLKFHESSA PTIAAYSPLQ EYQGHFELAL GHSMVCTNFC NSEQSYGVYS PYGAQTMAGR  120
MLLPPAIATD VGPIYVNAKQ FNGIIRRRLA RAKAEREHRV SRSRKPYLHE SRHRHAMRRA  180
RGIGGRFLNT KNASSAAAAA PVSSGGGDHG ASNKSSSASE ATRVYDDDDD DMGAGGGGDG  240
GDFHHAMGHL RSPAFFPSLA AMMDGGGGGG EGKWATATPH HGCRVDLLKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172181RHRHAMRRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.32e-25NF-YA family protein