PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G01330.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TCP

Protein Properties

Length: 435aa MW: 46088 Da PI: 9.2761

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G01330.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.3	7.9e-40	60	199	2	132
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssasec.........eaesssss 81 g+kdrhsk++T++g RdRRvRls+++a++f+dLqd+LG+d++sk+ieWL+++a +ai++l+++ ++ +as++ ONIVA07G01330.1 60 SGGKDRHSKVYTAKGIRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAAAAIDKLPSLdtasfPTHPASSAavaaaaappL------- 146 689***********************************************************77666222222222221112222....... PP TCP 82 asnsssg.......kaaksaakskksqksaasalnlak.esrakarararertrekmri 132 + ++ +++ +s+ s++s+ s+l+l++ esr kar+rarer++ + ONIVA07G01330.1 147 ------PhaereqqQQLTKSGCSSTSETSKGSVLSLSRsESRVKARERARERSSAAAAA 199 ......0222223356777779999************************99877665 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MELAGSNNKR GRVRGPNDDD DDAGEPDAKR HHHQLLLPWP QQQQQQQHPA SRIYRVSRAS 60 GGKDRHSKVY TAKGIRDRRV RLSVSTAIQF YDLQDRLGYD QPSKAIEWLI KAAAAAIDKL 120 PSLDTASFPT HPASSAAVAA AAAPPLPHAE REQQQQLTKS GCSSTSETSK GSVLSLSRSE 180 SRVKARERAR ERSSAAAAAA SKDAGDDAAT PTAPTAAPAS SQAASFTELL TGMAAANASP 240 ADHKQQQAWQ PMTVAAATAD YIGFAAAAAP HTQPRKSAAG HHSAMPHTFA SPAPHLANIT 300 PIAMAPAQHF TLTPAAAEHH AEMTHYSFDH FMPVHAAAAA AAAASTPAGG DYNLNFSMSS 360 GLVGVHSRGT LQSNSQSHLS SHHHHHHQQQ QQQQQLQRLS APLDAPNIPF LFSPAAAPTA 420 ADTQFAAALQ LWDGK

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MELAGSNNKR GRVRGPNDDD DDAGEPDAKR HHHQLLLPWP QQQQQQQHPA SRIYRVSRAS  60
GGKDRHSKVY TAKGIRDRRV RLSVSTAIQF YDLQDRLGYD QPSKAIEWLI KAAAAAIDKL  120
PSLDTASFPT HPASSAAVAA AAAPPLPHAE REQQQQLTKS GCSSTSETSK GSVLSLSRSE  180
SRVKARERAR ERSSAAAAAA SKDAGDDAAT PTAPTAAPAS SQAASFTELL TGMAAANASP  240
ADHKQQQAWQ PMTVAAATAD YIGFAAAAAP HTQPRKSAAG HHSAMPHTFA SPAPHLANIT  300
PIAMAPAQHF TLTPAAAEHH AEMTHYSFDH FMPVHAAAAA AAAASTPAGG DYNLNFSMSS  360
GLVGVHSRGT LQSNSQSHLS SHHHHHHQQQ QQQQQLQRLS APLDAPNIPF LFSPAAAPTA  420
ADTQFAAALQ LWDGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	2e-36	TCP family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G01330.1