PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA07G01070.2

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bHLH

Protein Properties

Length: 482aa MW: 51267.5 Da PI: 5.8375

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA07G01070.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.2	6.1e-18	297	343	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka+iL +A+eY+ksLq ONIVA07G01070.2 297 VHNLSERRRRDRINEKLRALQELVPHC-----NKTDKASILDEAIEYLKSLQ 343 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MLRTRLPHSF SALISPTKSS PTTTIHPFLP LDISPCFLAT LTSSPRARGA RRTSVTCRLS 60 KNCGAMDAGA TARSSSSSAM MMNQKKPLLS DGELVELLWQ DGGVVAHAQT RHRSSDVLAR 120 SGVTGEEETA SAWFADGGGA GGGGDDALGV GMGRDIYSQL WHSFANVDGH AAGALALATP 180 TPTPRAAARS DDVSSRLDEA GLSICGSNAV VAPALPADDD DDIDAAAPRE EEEEEEGPGA 240 ARAAGASSSG GSGSGSGSYP LFKRGREELV DSLSEVADET RPSKRPAAKR RTRAAEVHNL 300 SERRRRDRIN EKLRALQELV PHCNKTDKAS ILDEAIEYLK SLQMQVQIMW MTTGIVPMMF 360 PGTHQLMPPM GMGLNTACMP GAQAQGLNQM QRTTYYMNNS LPNQMPQIPS PAMNAPSVPD 420 DMQNDNRIRG PRNPFLHCND TLTATAQVPG LFTYGSQIAE QNEIQELLSG AVIPSSSDGT 480 IK

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MLRTRLPHSF SALISPTKSS PTTTIHPFLP LDISPCFLAT LTSSPRARGA RRTSVTCRLS  60
KNCGAMDAGA TARSSSSSAM MMNQKKPLLS DGELVELLWQ DGGVVAHAQT RHRSSDVLAR  120
SGVTGEEETA SAWFADGGGA GGGGDDALGV GMGRDIYSQL WHSFANVDGH AAGALALATP  180
TPTPRAAARS DDVSSRLDEA GLSICGSNAV VAPALPADDD DDIDAAAPRE EEEEEEGPGA  240
ARAAGASSSG GSGSGSGSYP LFKRGREELV DSLSEVADET RPSKRPAAKR RTRAAEVHNL  300
SERRRRDRIN EKLRALQELV PHCNKTDKAS ILDEAIEYLK SLQMQVQIMW MTTGIVPMMF  360
PGTHQLMPPM GMGLNTACMP GAQAQGLNQM QRTTYYMNNS LPNQMPQIPS PAMNAPSVPD  420
DMQNDNRIRG PRNPFLHCND TLTATAQVPG LFTYGSQIAE QNEIQELLSG AVIPSSSDGT  480
IK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	289	306	KRRTRAAEVHNLSERRRR
2	302	307	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	1e-27	bHLH family protein

Link Out ? help Back to Top
Ensembl	ONIVA07G01070.2