PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G31350.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

ARF

Protein Properties

Length: 698aa MW: 75739.3 Da PI: 6.7148

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G31350.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.2	7.3e-24	125	226	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f k+lt+sd+++ g +++p+ +ae++ ++++ + + +d +g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD++vF+ ++ ONIVA06G31350.1 125 FAKTLTQSDANNGGGFSVPRFCAETIfpeldysSEPPVQ--SVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFM--RD 214 89*******************999987656666..5********************************************..56 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 ++++ +v+++r+ ONIVA06G31350.1 215 EGGNIHVGLRRA 226 99*****996 PP
2	Auxin_resp	118.6	4.9e-39	280	363	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa++a+t+++Fev+Y+Prast+eF+v+++ v++a+ v++++GmRfkmafetedss++++ +Gtv+gv+++dpvrWp+S+Wr+L+ ONIVA06G31350.1 280 AATRATTGQPFEVLYYPRASTPEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWfMGTVAGVQASDPVRWPQSPWRLLQ 363 78999*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 698 aa Download sequence
MLTFMELAGP TEGDGGGSVD SQLWAACAGS MSSVPPVGAA VYYFPQGHAE QASAAVDLSS 60 ARVPPLVPCR VVAVRFMADA ESDEVFAKIR LVPLRPGDAV VDVGEAAAAE ARREEENSRP 120 RPTSFAKTLT QSDANNGGGF SVPRFCAETI FPELDYSSEP PVQSVCAKDV HGVEWTFRHI 180 YRGTPRRHLL TTGWSPFVNK KQLTAGDSIV FMRDEGGNIH VGLRRAKRGF CSIGGDDESL 240 SSIPGWDQYR GLMRRNATAT ATGGRTPPKG KVPPENVLTA ATRATTGQPF EVLYYPRAST 300 PEFCVRAAAV RTAMAVQWCP GMRFKMAFET EDSSRISWFM GTVAGVQASD PVRWPQSPWR 360 LLQVTWDEPE LLQNVKRVCP WLVELVSSMP NLHLPSFSPP RKKPRNPPYA ELPLEGQIFT 420 GPVFPPNPMA HDHHHHHGFP FLPFPDSSAQ PAGIQGARHA QFASPFPEFH IGNLQPNLML 480 YAGIRLPPAD RAAPAPRPRI IISTDLTIGS PRKPDDAACS PSSGGKKIDD TKPRGFLLFG 540 QAILTEEQIK NGNSDGRPAS PNWDAEKAPN TSEGSDSGVT QGSPTKNTTP SWSLPYFGGN 600 NISRASEYEL NPGQCKVFVE SETVGRSLDL SALSSFEELY ACLSDMFSIG SDELRSHLVY 660 RSPAGEVKHA GDEPFCAFVK SARKLRILTD AGSDNLGD

Sequence ? help Back to Top

Protein Sequence Length: 698 aa Download sequence

MLTFMELAGP TEGDGGGSVD SQLWAACAGS MSSVPPVGAA VYYFPQGHAE QASAAVDLSS  60
ARVPPLVPCR VVAVRFMADA ESDEVFAKIR LVPLRPGDAV VDVGEAAAAE ARREEENSRP  120
RPTSFAKTLT QSDANNGGGF SVPRFCAETI FPELDYSSEP PVQSVCAKDV HGVEWTFRHI  180
YRGTPRRHLL TTGWSPFVNK KQLTAGDSIV FMRDEGGNIH VGLRRAKRGF CSIGGDDESL  240
SSIPGWDQYR GLMRRNATAT ATGGRTPPKG KVPPENVLTA ATRATTGQPF EVLYYPRAST  300
PEFCVRAAAV RTAMAVQWCP GMRFKMAFET EDSSRISWFM GTVAGVQASD PVRWPQSPWR  360
LLQVTWDEPE LLQNVKRVCP WLVELVSSMP NLHLPSFSPP RKKPRNPPYA ELPLEGQIFT  420
GPVFPPNPMA HDHHHHHGFP FLPFPDSSAQ PAGIQGARHA QFASPFPEFH IGNLQPNLML  480
YAGIRLPPAD RAAPAPRPRI IISTDLTIGS PRKPDDAACS PSSGGKKIDD TKPRGFLLFG  540
QAILTEEQIK NGNSDGRPAS PNWDAEKAPN TSEGSDSGVT QGSPTKNTTP SWSLPYFGGN  600
NISRASEYEL NPGQCKVFVE SETVGRSLDL SALSSFEELY ACLSDMFSIG SDELRSHLVY  660
RSPAGEVKHA GDEPFCAFVK SARKLRILTD AGSDNLGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G31350.1