PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G31120.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 448aa MW: 49155.2 Da PI: 4.9832

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G31120.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.2	1.4e-16	62	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a k++G W+ I +++g ++t+ q++s+ qk+ ONIVA06G31120.1 62 REKWTEEEHDKFLEALKLYGRS-WRQIQEHIG-TKTAVQIRSHAQKF 106 789***************55.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MPQLEEKDSS DLAINKGPSL DLVKSPLMMN DASATVTAMQ PNEGMEEFPV KVRKPYTITK 60 QREKWTEEEH DKFLEALKLY GRSWRQIQEH IGTKTAVQIR SHAQKFFSKV VREPGSNNAI 120 EIPPPRPKRK PLHPYPRKCA NSGSDANPAT AQLKLAPGSS SSGSDQENGS PISVLSAMQS 180 DAFGSSVSNP STRCTSPASS DDGNNIPTFT SGEDNNVPCE PTVIDPSQSH KEIDQDRKDV 240 NNMSEEDSSE EEVQETSLKL FGRTVVIPDP RKRSSSDPKH ESEEQISQPS NEEMLQASSS 300 VGEIPAAYCA PNGWFMSYNS FPFQFGESAA DARIPPLHVW WPYYGFAPIS HPRGLSTVMQ 360 QTEGSDESDG GKSHSSESSS DSGENVQMTA PQSSRIVESL GAIYVRDSGS SFELKPSANS 420 AFVRVKPSNS GDEEVIRGFV PYKRCKFQ

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MPQLEEKDSS DLAINKGPSL DLVKSPLMMN DASATVTAMQ PNEGMEEFPV KVRKPYTITK  60
QREKWTEEEH DKFLEALKLY GRSWRQIQEH IGTKTAVQIR SHAQKFFSKV VREPGSNNAI  120
EIPPPRPKRK PLHPYPRKCA NSGSDANPAT AQLKLAPGSS SSGSDQENGS PISVLSAMQS  180
DAFGSSVSNP STRCTSPASS DDGNNIPTFT SGEDNNVPCE PTVIDPSQSH KEIDQDRKDV  240
NNMSEEDSSE EEVQETSLKL FGRTVVIPDP RKRSSSDPKH ESEEQISQPS NEEMLQASSS  300
VGEIPAAYCA PNGWFMSYNS FPFQFGESAA DARIPPLHVW WPYYGFAPIS HPRGLSTVMQ  360
QTEGSDESDG GKSHSSESSS DSGENVQMTA PQSSRIVESL GAIYVRDSGS SFELKPSANS  420
AFVRVKPSNS GDEEVIRGFV PYKRCKFQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37260.1	2e-38	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G31120.1