PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G30670.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 336aa    MW: 35584.3 Da    PI: 7.5813
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G30670.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.27.8e-1379123147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I +++g  +t  q++s+ qky
  ONIVA06G30670.1  79 RESWTEPEHDKFLEALQLFDRD-WKKIEAYVG-SKTVIQIRSHAQKY 123
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MVSMSATPNP IDASVVSAAA AVAGGGGGGD GGGGGGGKEK EKQVVAAPLQ PPMAVPAPAA  60
AVGEEARKVR KPYTITKSRE SWTEPEHDKF LEALQLFDRD WKKIEAYVGS KTVIQIRSHA  120
QKYFLKVQKN GTGEHLPPPR PKRKAAHPYP QKASKNVSPA AISQPPPLGE QGCVMSMDTS  180
PVIRNTNASA VVPSWDNSIA QPLSASRTQG TGAVATNNCS SSIESPSTTW PTSEAVEQEN  240
MLRPLRAMPD FAQVYSFLGS IFDPDTSGHL QTLKAMDPID VETVLLLMRN LSMNLTSPNF  300
AAHLSLLSSC NSGGDPIKSE GMENLGSPQS CHLPFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.23e-83MYB_related family protein