PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G30350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 192aa MW: 20803.7 Da PI: 4.5273 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 55.6 | 1.1e-17 | 66 | 121 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 DgynWr GqK v+g + + YY C++a+C + k v rsa d+++ +++ +g+Hnh+ ONIVA06G30350.1 66 DGYNWRMCGQKLVQGGCHQKFYYECSQANCGAEKSVTRSA-DGQIKKTVCKGSHNHP 121 9***************************************.***************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence |
MENNQSGQAQ DGMADQRFRS WLTEQLNMQQ QNAGCSSNPA PAVMQMPALP SHTDYGGIYP 60 NPTEYDGYNW RMCGQKLVQG GCHQKFYYEC SQANCGAEKS VTRSADGQIK KTVCKGSHNH 120 PRSSERVFGD GSATLDAIPV GEILQAAGVI RPSVAMPRNE EEDGLQSGSS DSEDDDASEA 180 RAAGDDNAIR CY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01080.1 | 2e-16 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G30350.1 |