PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G29220.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family C3H
Protein Properties Length: 448aa    MW: 49177.5 Da    PI: 10.0026
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G29220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH31.43.3e-10526325
                     S---SGGGGTS--TTTTT-SS-S CS
          zf-CCCH  3 telCrffartGtCkyGdrCkFaH 25
                     +e+Cr+f+r G CkyG++C++ H
  ONIVA06G29220.1  5 QEICRNFQR-GSCKYGAQCRYLH 26
                     79*******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MSRRQEICRN FQRGSCKYGA QCRYLHASPH QQQQQQQQQA KPNPFGFGTG SRQQQQPSFG  60
SQFQQQQQQQ QKPNPFGFGV QGANAQSRNA PGPAKPFQNK WVRDPSAPTK QAEAVQPPQA  120
QAAHTSCEDP QSCRQQISED FKNEAPIWKL TCYAHLRNGP CDIKGDISFE ELRAKAYEEG  180
KQGHSLQSIV EGERNLQNAK LMEFTNLLNS ARPSQTPSFP TMSSFPEVKN NSSFGASQTN  240
GPPVFSSFSQ IGAATNIGPG PGTTTPGMPA SSPFGHPSSA PLAAPTFGSS QMKFGVSSVF  300
GNQGSGQPFG SFQAPRFPSS KSPASSVQHR DIDRQSQELL NGMVTPPSVM FEESVGNNKN  360
ENQDDSIWLK EKWAIGEIPL DEPPQRHSRK PSGSFGSSCS SINNFLKSSA GTTKMKMKMN  420
NLVKEKWAIG ELQGQQRNST TNRRRIHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.12e-48C3H family protein