PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G29090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARF
Protein Properties Length: 1127aa    MW: 124560 Da    PI: 6.434
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G29090.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.79.6e-23121222199
                      EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      f+k+lt sd++++g +++p++ ae++       + +++  ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F   ++
  ONIVA06G29090.1 121 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFV--RD 210
                      99*****************************954.4444.49************************************************..56 PP

                      SEE..EEEEE-S CS
               B3  88 sefelvvkvfrk 99 
                      ++++l+++++r+
  ONIVA06G29090.1 211 EKQQLLLGIRRA 222
                      88889****997 PP

2Auxin_resp1187.8e-39247330183
       Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                      aahaa+++s+F+++YnPras++eFv++++k++ka++ +++s+GmRf+m+fete+  +rr++Gt++g+sdldpvrW+nS+Wr+L+
  ONIVA06G29090.1 247 AAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYgNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQ 330
                      79**********************************9*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1127 aa     Download sequence    
MMKQAQQQPP PPPASSAATT TTAMAAAAAA AVVGSGCEGE KTKAPAINSE LWHACAGPLV  60
SLPPAGSLVV YFPQGHSEQA DPETDEVYAQ MTLQPVTSYG KEALQLSELA LKQARPQTEF  120
FCKTLTASDT STHGGFSVPR RAAEKIFPPL DFSMQPPAQE LQARDLHDNV WTFRHIYRGQ  180
PKRHLLTTGW SLFVSGKRLF AGDSVIFVRD EKQQLLLGIR RANRQPTNIS SSVLSSDSMH  240
IGILAAAAHA AANNSPFTIF YNPRASPTEF VIPFAKYQKA VYGNQISLGM RFRMMFETEE  300
LGTRRYMGTI TGISDLDPVR WKNSQWRNLQ VGWDESAAGE RRNRVSIWEI EPVAAPFFIC  360
PPPFFGAKRP RQLDDESSEM ENLLKRAMPW LGEEICIKDP QTQNTIMPGL SLVQWMNMNM  420
QQSSSFANTA MQSEYLRSLS NPNMQNLGAA DLSRQLCLQN QLLQQNNIQF NTPKLSQQMQ  480
PVNELAKAGI PLNQLGVSTK PQEQIHDASN LQRQQPSMNH MLPLSQAQTN LGQAQVLVQN  540
QMQQQHASST QGQQPATSQP LLLPQQQQQQ QQQQQQQQQQ QQQKLLQQQQ QQLLLQQQQQ  600
LSKMPAQLSS LANQQFQLTD QQLQLQLLQK LQQQQQSLLS QPAVTLAQLP LIQEQQKLLL  660
DMQQQLSNSQ TLSQQQMMPQ QSTKVPSQNT PLPLPVQQEP QQKLLQKQAM LADTSEAAVP  720
PTTSVNVIST TGSPLMTTGA THSVLTEEIP SCSTSPSTAN GNHLLQPILG RNKHCSMINT  780
EKVPQSAAPM SVPSSLEAVT ATPRMMKDSP KLNHNVKQSV VASKLANAGT GSQNYVNNPP  840
PTDYLETASS ATSVWLSQND GLLHQNFPMS NFNQPQMFKD APPDAEIHAA NTSNNALFGI  900
NGDGPLGFPI GLGTDDFLSN GIDAAKYENH ISTEIDNSYR IPKDAQQEIS SSMVSQSFGA  960
SDMAFNSIDS TINDGGFLNR SSWPPAAPLK RMRTFTKVYK RGAVGRSIDM SQFSGYDELK  1020
HALARMFSIE GQLEERQRIG WKLVYKDHED DILLLGDDPW EEFVGCVKCI RILSPQEVQQ  1080
MSLEGCDLGN NIPPNQACSS SDGGNAWRAR CDQNSGNPSN GSYEQFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.10.0ARF family protein