PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G27040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 396aa MW: 42637.2 Da PI: 9.836 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.9 | 5.9e-30 | 250 | 309 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ k++++pr+Y+rC++a Cpvkkkv+rsa+d++v++ tYegeHnh ONIVA06G27040.1 250 VKDGYQWRKYGQKVTKDNPCPRAYFRCSFApACPVKKKVQRSADDNTVLVATYEGEHNHA 309 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence |
MAKMLPPPSQ SVSSRPPSWL YIPPRRRHGT FTSSCAFRLS PSSPSSPPPT VLDFQYIQFM 60 DSWIEQTSLS LDLNVGLPST ARRSSAPAAP IKVLVEENFL SFKKDHEVEA LEAELRRASE 120 ENKKLTEMLR AVVAKYTELQ GQVNDMMSAA AAAAVNAGNH QSSTSEGGSV SPSRKRIRSV 180 DSLDDAAHHR KPSPPFVAAA AAAAYASPDQ MECTSAAAAA AAKRVVREDC KPKVSKRFVH 240 ADPSDLSLVV KDGYQWRKYG QKVTKDNPCP RAYFRCSFAP ACPVKKKVQR SADDNTVLVA 300 TYEGEHNHAQ PPHHDAGSKT AAAAKHSQHQ PPPSAAAAVV RQQQEQAAAA GPSTEVAARK 360 NLAEQMAATL TRDPGFKAAL VTALSGRILE LSPTKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25000.1 | 5e-46 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G27040.1 |