PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G26670.3

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

TALE

Protein Properties

Length: 367aa MW: 39549.3 Da PI: 7.223

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G26670.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.9	1.5e-07	310	343	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + ONIVA06G26670.3 310 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 343 569*****************************87 PP
2	ELK	29.1	2.3e-10	264	285	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ ONIVA06G26670.3 264 ELKHELKQGYREKLVDIREEIL 285 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MTQVRGASRL IPSLPPNCYN HKSSSSSSSS SSSSSSTSRA AAAAAAAVRV MAFHYQDHAL 60 AMDAAAAAAE TGGHHHPGFV GAGGVVGVGG GGGWEREKAA IAAHPLYERL LEAHVACLRV 120 ATPVDQLPRI DAQIAARPPP LAAATAAAAA AAAGGAPSGG EELDLFMTHY VLLLCSFKEQ 180 LQQHVRVHAM EAVMACWELE QTLQSLTGAS PGEGSGATMS DDEDNQVDSE SNMFDGNDGS 240 DGMGFGPLML TEGERSLVER VRQELKHELK QGYREKLVDI REEILRKRRA GKLPGDTAST 300 LKAWWQAHSK WPYPTEEDKA RLVQETGLQL KQINNWFINQ RKRNWHSNPA SSSSDKSKRK 360 RYRVVDF

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MTQVRGASRL IPSLPPNCYN HKSSSSSSSS SSSSSSTSRA AAAAAAAVRV MAFHYQDHAL  60
AMDAAAAAAE TGGHHHPGFV GAGGVVGVGG GGGWEREKAA IAAHPLYERL LEAHVACLRV  120
ATPVDQLPRI DAQIAARPPP LAAATAAAAA AAAGGAPSGG EELDLFMTHY VLLLCSFKEQ  180
LQQHVRVHAM EAVMACWELE QTLQSLTGAS PGEGSGATMS DDEDNQVDSE SNMFDGNDGS  240
DGMGFGPLML TEGERSLVER VRQELKHELK QGYREKLVDI REEILRKRRA GKLPGDTAST  300
LKAWWQAHSK WPYPTEEDKA RLVQETGLQL KQINNWFINQ RKRNWHSNPA SSSSDKSKRK  360
RYRVVDF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	341	361	RKRNWHSNPASSSSDKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-139	TALE family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G26670.3