PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G25990.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

ERF

Protein Properties

Length: 418aa MW: 43132.5 Da PI: 5.9249

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G25990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	43.8	6.5e-14	129	181	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G r ++ +g+++AeIr + ++ r++lg+fgtaeeAa a++ a+ ++g ONIVA06G25990.1 129 KYRGARKRP-WGKYAAEIRIR---NtmgVKERVWLGTFGTAEEAAWAYDTAATVIHG 181 8******.******5...445588*******************977765 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MGRPVKQKTT TWLVELLREY CQRAAAQATA GNGAVAAAAA VEGEINTDGL AALAAEAEGF 60 AAAAAAVEGE INTEGLAALA AEAEGFAAAN GEGWVAPAVE GEGEGFVGAP VVEGEEGLTA 120 ELPVAAERKY RGARKRPWGK YAAEIRIRNT MGVKERVWLG TFGTAEEAAW AYDTAATVIH 180 GDKATTNFPR APLRPATTPV MRSMLVFFGI AHLVRSLVPR ARGPRGRGGG AGGRGRSRRR 240 RAAAAAAPSA PASEAPSPPP PSSALVPEPE LQVQGGRGER GRGRGRGRGG GRGGRRGRGR 300 TPARVVAEDS PMLQATTPAA APAPAPALAP APANQAIFQP MIIPPGGVVV APDDFLLSAI 360 SDDEPVLPHK KPKLLGVYTP PDSPDQFVME FFADLGDGDD ILSSSFWQDP AGDGEDTQ

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MGRPVKQKTT TWLVELLREY CQRAAAQATA GNGAVAAAAA VEGEINTDGL AALAAEAEGF  60
AAAAAAVEGE INTEGLAALA AEAEGFAAAN GEGWVAPAVE GEGEGFVGAP VVEGEEGLTA  120
ELPVAAERKY RGARKRPWGK YAAEIRIRNT MGVKERVWLG TFGTAEEAAW AYDTAATVIH  180
GDKATTNFPR APLRPATTPV MRSMLVFFGI AHLVRSLVPR ARGPRGRGGG AGGRGRSRRR  240
RAAAAAAPSA PASEAPSPPP PSSALVPEPE LQVQGGRGER GRGRGRGRGG GRGGRRGRGR  300
TPARVVAEDS PMLQATTPAA APAPAPALAP APANQAIFQP MIIPPGGVVV APDDFLLSAI  360
SDDEPVLPHK KPKLLGVYTP PDSPDQFVME FFADLGDGDD ILSSSFWQDP AGDGEDTQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	287	RGERGRGRGRG
2	280	290	RGERGRGRGRG
3	284	294	RGERGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51190.1	9e-13	ERF family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G25990.1