PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G24670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | C2H2 | ||||||||
Protein Properties | Length: 397aa MW: 42817.5 Da PI: 7.6627 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.7e-05 | 226 | 245 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ ONIVA06G24670.1 226 FSCPVCYKTFNRYNNMQMHM 245 89*****************9 PP | |||||||
2 | zf-C2H2 | 14.1 | 0.00014 | 310 | 332 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ ONIVA06G24670.1 310 FMCRKCGKAFAVRGDWRTHEKNC 332 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 397 aa Download sequence |
MGDPYTNFLR GYHHHHRSHH PLHFPPPPPP PPPPYAASFS GLYSSYLHPP PPPSSPPIRE 60 ALPLLSLTPS TTHDDDHHHR RHDQDHHHHH KQGQEKNSHG GGGAASCSNN DGKRESPSAA 120 AAADDQAAEV TVALHIGLPS PSPSDAAAAA GNQAAAAAAA AEASAAGGGS SRMQVEEEGG 180 EEEDEDEAAA TATLPLGCAS IGIGKLTKGQ YWIPTPSQIL IGPTQFSCPV CYKTFNRYNN 240 MQMHMWGHGS QYRKGPESLR GTQPTAMLRL PCYCCAAGCR NNIDHPRARP LKDFRTLQTH 300 YKRKHGIKPF MCRKCGKAFA VRGDWRTHEK NCGKLWYCAC GSDFKHKRSL KDHIRAFGRG 360 HAACGIDSFD DLDADDDPSS DLDHASASAS ASASRVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-115 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G24670.1 |