PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G23990.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HB-other
Protein Properties Length: 316aa    MW: 35126.6 Da    PI: 4.6753
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G23990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.33.1e-09248295653
                      S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
         Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                      +++k qle+Le+++ +++ p+ +++  + + ++L+ + +  WF  rR 
  ONIVA06G23990.1 248 RLKKVQLETLERVYSRTKRPTNTMISSIVQVTSLPRKTIVKWFEDRRE 295
                      67899*****************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MAAMVGAPLA VAAAAAAPGA RVFLARPLLR RSPRGVACAL RRRPSKYKNK IQNEEVVVED  60
DIGGGGEDDD DALEALFKQL EEDLKNDDLS VEDDDDGISE EDMARFEQEL AEAIGDIADA  120
DESGEGSSLG SEAYGNDEKT DEIKRPELKN WQLKRLARAL KIGRRKTSIK NLAGELGLDR  180
TLVIELLRNP PPKLLFMSDS LPDEDPSKPE IKEIEPSPVV DNADVTETKP QTELPVHVMC  240
AEWSSQKRLK KVQLETLERV YSRTKRPTNT MISSIVQVTS LPRKTIVKWF EDRREQDGVP  300
DHRVAFKRSL SETIAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-60HB-other family protein