PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G22200.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 510aa    MW: 56156.3 Da    PI: 9.6897
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G22200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM98.41e-30542311128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 
                      lp+G++F+Ptd+el+ e+L++kv+          ++++   i+   +i++++P++Lp  v+++  + +fF++ +k+y+tg+rk+r+        
  ONIVA06G22200.1  54 LPAGVKFDPTDQELI-EHLEAKVRPGGeaaahplIDEFIPtIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTRKRRKiqppaaaa 145
                      799************.99*****988856665543333333766646**********.556667799******************88******* PP

              NAM  78 ..................................tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                                         ++ +W++tgk+++v+  +g++ g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  ONIVA06G22200.1 146 ssgggggnasssssasaaaavarhghqqqqqqqqRSETRWHKTGKTRAVVG-GGRQRGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 231
                      *****************************9998755789***********9.99************5547999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    
MDGVVAEDQA GGGGGGHRRL IGSRIEEHRK YMSEESCCPR CGHKIDRKLD WVGLPAGVKF  60
DPTDQELIEH LEAKVRPGGE AAAHPLIDEF IPTIEGEDGI CYTHPEKLPG VSKDGLSRHF  120
FHRPSKAYTT GTRKRRKIQP PAAAASSGGG GGNASSSSSA SAAAAVARHG HQQQQQQQQR  180
SETRWHKTGK TRAVVGGGRQ RGCKKILVLY TNFGKHRKPE KTNWVMHQYH LGEAEEERDG  240
ELVVSKIFYQ TQPRQCAAAD AAATASASAV DRRTTSGRDR AAAPMASANV SVAAFHGGAA  300
GFDEFSFAQF RSSFEEAGMG ASSSDHQSAM VDQRRQQQQH DDDEHDHRRG GGGHHYVGQQ  360
QSVAATFHVV SSPADPIARL MSPPPAHQGT VMLRQPEPPY IYHHQEDERP HQPRKFDGRS  420
TSGSGLEEVI MGCTSRRSKG GETSGGKDGT EWQYPSFWPS DSQDHHGWKF HLSAQIYMSK  480
ETKMILKQSK RERQKKKKER KNKGDITRKI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1492498ERQKKKK
2493499RQKKKKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-101NAC family protein