PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G21150.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 543aa MW: 58390.3 Da PI: 6.3488

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G21150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.8	1.8e-31	127	180	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ ONIVA06G21150.1 127 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 180 8****************************************************7 PP
2	Myb_DNA-binding	47.9	3.1e-15	128	179	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ ++m+ g++ ++ks++q+y+ ONIVA06G21150.1 128 RLRWTPDLHMAFVHAVERLGGQeraTPKLVLQMMNvRGLSIAHVKSHLQMYR 179 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MGEVKEKEVV EIFEHDHDNK IRSPENSVPP AMVLDLNEVF GEGSEEGGVG EDGDEEDDDE 60 DDDDDDDDDG GSTSEVAGGG RSSSNNSSTN HNSGSDKDHD MNSSSSKADG GGDRVPTVRQ 120 YNRSKLPRLR WTPDLHMAFV HAVERLGGQE RATPKLVLQM MNVRGLSIAH VKSHLQMYRS 180 KKLDHESGHE RGAISSVFSP MEFHMRRGDH RFHHHDMFFQ RAAAAGVSPF SSRMLHENGG 240 GFFASRNPGL PESSRLYGLF QRRQQAPMQK FDFKNCDSFS RNQEWAFNQQ HAAARAAGAV 300 NGHGPAKGLI HEMIFRKEGK PTSHLFDVRD AIASTRVTSA TTAAAADHRL DGAGKAGNFD 360 WIGSSSSRPL TRTMSAAAAA TMGDHHHLRW RGGAAGSGNT TASSDPVVAS EAALGSLLER 420 AKTKATEAMR LETPVKMTVA AVAAEEINGR TPDLQLSLSP NAGDHRSAGK KRKFLSEQEV 480 DSDKQQLPLT LSLSLRGGGD NGGGGGGEAA GRLEEEMTGS SSSKKAALGL STLDLTMSIK 540 ALE

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MGEVKEKEVV EIFEHDHDNK IRSPENSVPP AMVLDLNEVF GEGSEEGGVG EDGDEEDDDE  60
DDDDDDDDDG GSTSEVAGGG RSSSNNSSTN HNSGSDKDHD MNSSSSKADG GGDRVPTVRQ  120
YNRSKLPRLR WTPDLHMAFV HAVERLGGQE RATPKLVLQM MNVRGLSIAH VKSHLQMYRS  180
KKLDHESGHE RGAISSVFSP MEFHMRRGDH RFHHHDMFFQ RAAAAGVSPF SSRMLHENGG  240
GFFASRNPGL PESSRLYGLF QRRQQAPMQK FDFKNCDSFS RNQEWAFNQQ HAAARAAGAV  300
NGHGPAKGLI HEMIFRKEGK PTSHLFDVRD AIASTRVTSA TTAAAADHRL DGAGKAGNFD  360
WIGSSSSRPL TRTMSAAAAA TMGDHHHLRW RGGAAGSGNT TASSDPVVAS EAALGSLLER  420
AKTKATEAMR LETPVKMTVA AVAAEEINGR TPDLQLSLSP NAGDHRSAGK KRKFLSEQEV  480
DSDKQQLPLT LSLSLRGGGD NGGGGGGEAA GRLEEEMTGS SSSKKAALGL STLDLTMSIK  540
ALE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-34	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G21150.1