PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G15070.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 450aa MW: 49413.7 Da PI: 4.276

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G15070.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.9	1.7e-11	237	282	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 WTteE+ +++++ + +G g Wk+I+ + +t+ q+ s+ qky ONIVA06G15070.1 237 RFWTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQKY 282 56***************************9***********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 450 aa Download sequence
MEWTAAEMDE ARSIVARLTN AYDSSALVAG AGNGDTRHDR IVRELQAWFP WRTMDQLIGL 60 YIELMAEEPA AAQPQYFDAG AVVDPTHDRI VRELLAWLPW RTMDQLIGLY IELMAEEPAA 120 AQPQYFDAGA VVDPTFDFFN DHNNFLGMPP PPVQQADDHA MNNVVADAGM NYFYGGAGGG 180 AMVFGGGAPM GETVEQAAPP APAPVPVVPV VMNRDDDEVN NQGGGRHRAA PTNTTRRFWT 240 TEEHRQFLRG LRVYGRGEWK SISMNFVRSK TPVQVSSHAQ KYFRRVESAA ADKQRYSIND 300 VGLNDNDDDD TAAMDGTNSY SNNNFGGWQS LAFAGGHLEP VSGGGAAGQV IAPASSSAAA 360 MNSAAQFWAP MLFNPQIQQQ FMQMQAQTQQ AWNDQHMMMA AAPMEGATDT NFEPAGAGNY 420 YYHQQQEEEE GGAYGVPADQ WMMNQNNNMF

Sequence ? help Back to Top

Protein Sequence Length: 450 aa Download sequence

MEWTAAEMDE ARSIVARLTN AYDSSALVAG AGNGDTRHDR IVRELQAWFP WRTMDQLIGL  60
YIELMAEEPA AAQPQYFDAG AVVDPTHDRI VRELLAWLPW RTMDQLIGLY IELMAEEPAA  120
AQPQYFDAGA VVDPTFDFFN DHNNFLGMPP PPVQQADDHA MNNVVADAGM NYFYGGAGGG  180
AMVFGGGAPM GETVEQAAPP APAPVPVVPV VMNRDDDEVN NQGGGRHRAA PTNTTRRFWT  240
TEEHRQFLRG LRVYGRGEWK SISMNFVRSK TPVQVSSHAQ KYFRRVESAA ADKQRYSIND  300
VGLNDNDDDD TAAMDGTNSY SNNNFGGWQS LAFAGGHLEP VSGGGAAGQV IAPASSSAAA  360
MNSAAQFWAP MLFNPQIQQQ FMQMQAQTQQ AWNDQHMMMA AAPMEGATDT NFEPAGAGNY  420
YYHQQQEEEE GGAYGVPADQ WMMNQNNNMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	1e-19	MYB family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G15070.1