PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G15060.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family MYB_related
Protein Properties Length: 399aa    MW: 43554 Da    PI: 4.281
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G15060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-11188233247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        WTteE+ +++++ + +G g Wk+I+  +   +t+ q+ s+ qky
  ONIVA06G15060.1 188 RFWTTEEHRQFLRGLRVYGRGEWKSISMNFVRSKTPVQVSSHAQKY 233
                      56*****************************9*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MEWTAAEMDE ARSIVARLTN AYDSGTLVAG AGNGDTRHDR IVRELLAWLP WRTMDQLIGL  60
YIELMAEEPA AAQPQYFDAG AVVDPTFDFF NDHNNFLGIP PPPVQQADDH NMNNVVADAG  120
MNYYYGGGGA GGAMVFGGAP MGETVEQAAP PAPAPVPVVP VVMNRDDDEV NNQGGGRHRA  180
APTNTTRRFW TTEEHRQFLR GLRVYGRGEW KSISMNFVRS KTPVQVSSHA QKYFRRVESA  240
AADKQRYSIN DVGLNDDDDD DTAAMDGTNS YSNNNFGGWQ SLAFAGGHLE PVSGGGAAGQ  300
VIAPASSSAA AMNSAAQFWA PMLFNPQIQQ QFMQMQAQTQ QAWNDQHMMM AAAPMEGATD  360
TNFEPAGAVN YYQQQQEEEG GAYGVPADQW MMNQNNNMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11280.13e-21MYB family protein