PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G12810.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

Dof

Protein Properties

Length: 289aa MW: 28990.1 Da PI: 7.4336

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G12810.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.1	1.9e-38	28	84	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++++cprCds+ntkfCyynny+lsqPr+fCkaCrryWtkGG lrnvPvGgg+rk k+ ONIVA06G12810.1 28 EEVRCPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGGCRKPKR 84 6789**************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MQEFHPVPGL AGRLFGGAAA AAAVAAVEEV RCPRCDSSNT KFCYYNNYNL SQPRHFCKAC 60 RRYWTKGGLL RNVPVGGGCR KPKRPAPPPS SSFTGGGRGG GGCGHRDSKS ARSAGGGGDD 120 SGSTASATAT PAAAPASSNT LSAAVSQPSS VDALSPPPAP MFADQATAFA SLFAPPPPPP 180 SQALPAFASF TAQPKAEEDV ADAPALAATE QHRSSSAASF AAHSISPPFA AARSSDGPAA 240 AAAAAAADWA PPTAVLDAGM FDLAGAIGGD TSYWNAASWT DHDGTIYLP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	102	GGGRGGGG
2	96	103	GGGRGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	3e-29	Dof family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G12810.1