PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G11950.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 509aa MW: 56269.3 Da PI: 6.2731

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G11950.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	106.6	3e-33	149	288	1	128
NAM 1 lppGfrFhPtdeelvveyLkkk..vegkk...leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....s 80 lp+G++F+Ptd+el+++ L+k+ v +k +++ +i++v+ i++++P++Lp vk++ + +fF+++ k+y+tg rk+r+++ + ONIVA06G11950.1 149 LPRGVKFDPTDQELLWHLLAKHgkVGAKAhpfIDE--FIPTVEeddgICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGIRKRRKINtgdlaD 239 699**********99998862255555444233..2444422245******.677888899**************866334446 PP NAM 81 gyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k+v++ +g++ g+kk++v+y + r k+ekt+Wvmh+y+l ONIVA06G11950.1 240 VRWHKTGKTKPVVV-DGKHLGCKKIMVLYmsTMRGGKPEKTNWVMHQYHL 288 67********.999*******6545777788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MDAVQPSNAQ YKPRAPGLCA GVCVVSSPPP SPVNSGSKKK RENLGRPTTH RLSTSISIRF 60 SLQVRRLALA LVGSLVGRGG LRLPAGGAGA AMTGTSWIID SHRIASKIKN ASGSVDASKH 120 KWVSNPTKAC PRCNHIIDNS DVVHQWPGLP RGVKFDPTDQ ELLWHLLAKH GKVGAKAHPF 180 IDEFIPTVEE DDGICYTHPQ KLPGVKQDGS VSHFFHRTFK AYNTGIRKRR KINTGDLADV 240 RWHKTGKTKP VVVDGKHLGC KKIMVLYMST MRGGKPEKTN WVMHQYHLGT GEDEVEGQYV 300 VSKLFFQQQF KPGEKNAQDL TSADALESIV AEDLPNIPPL PLEEHVFTNQ ELEVLEKSET 360 ITDQGKETSE INNEDNAVED VAHMATEKPE DRDNPSSQDP KWWEGESQFL LDSQQLAENL 420 AICDEFLQSQ SQTSCGGGDD EPDKIKPRLA VYAQLPVEDL KKDLEECQRL DPSDGTNLEL 480 ENASEFRLSQ IEFSQDSFTT AWAGGKVID

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MDAVQPSNAQ YKPRAPGLCA GVCVVSSPPP SPVNSGSKKK RENLGRPTTH RLSTSISIRF  60
SLQVRRLALA LVGSLVGRGG LRLPAGGAGA AMTGTSWIID SHRIASKIKN ASGSVDASKH  120
KWVSNPTKAC PRCNHIIDNS DVVHQWPGLP RGVKFDPTDQ ELLWHLLAKH GKVGAKAHPF  180
IDEFIPTVEE DDGICYTHPQ KLPGVKQDGS VSHFFHRTFK AYNTGIRKRR KINTGDLADV  240
RWHKTGKTKP VVVDGKHLGC KKIMVLYMST MRGGKPEKTN WVMHQYHLGT GEDEVEGQYV  300
VSKLFFQQQF KPGEKNAQDL TSADALESIV AEDLPNIPPL PLEEHVFTNQ ELEVLEKSET  360
ITDQGKETSE INNEDNAVED VAHMATEKPE DRDNPSSQDP KWWEGESQFL LDSQQLAENL  420
AICDEFLQSQ SQTSCGGGDD EPDKIKPRLA VYAQLPVEDL KKDLEECQRL DPSDGTNLEL  480
ENASEFRLSQ IEFSQDSFTT AWAGGKVID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-141	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G11950.1