PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G10700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | E2F/DP | ||||||||
Protein Properties | Length: 425aa MW: 46833.5 Da PI: 8.4244 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 72.2 | 5.8e-23 | 57 | 122 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f++l+ +++ + v l+++a++L v +rRRiYDi+NVLe+++++ +++kn+++w+g ONIVA06G10700.1 57 RKQKSLGLLCTNFVALYDREDVESVGLDDAARRL---GV--ERRRIYDIVNVLESIGMLVRRAKNRYTWIG 122 79****************9999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 80.9 | 1.1e-25 | 203 | 283 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ + e ++++l+e+ak+L+ e ++++k+RR+YDi+NVL++lnliek ++k+++rw g ONIVA06G10700.1 203 RKEKSLGLLTQNFVKLFLTMEIETISLDEAAKRLLGEghaanNMRTKVRRLYDIANVLSSLNLIEKtqqadSRKPAFRWLG 283 79****************************************************************9999999******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MPAAADAPPP PPEVAPPAPA PAPAPAPYQP PRLAVADGAG GGGGGGGKPC RHHAYSRKQK 60 SLGLLCTNFV ALYDREDVES VGLDDAARRL GVERRRIYDI VNVLESIGML VRRAKNRYTW 120 IGFGGVPAAL AELKEMSLRA VSSVASPSLD ETSAANVSDD EDDDKLDDAE GDAESEKLSL 180 SQSIDNPSDK PDAPPCKLRS EHRKEKSLGL LTQNFVKLFL TMEIETISLD EAAKRLLGEG 240 HAANNMRTKV RRLYDIANVL SSLNLIEKTQ QADSRKPAFR WLGQAKRNEG VTVALPPTKT 300 LPNKRAFGTD LTNIDNKRGK LDSTMENRGK PTQDGGNLFN NLQRQLGQEN RSDFVYGPFH 360 PAGARKQEHG NRTVQEKERK SIQDWENLAS SFRPQYQNPG LNDLFGHYME AWRSWYSDLR 420 RDRAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-104 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G10700.1 |