PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G08290.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 270aa    MW: 28330.5 Da    PI: 4.9522
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G08290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-1768116355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ykGVr ++ +g+Wv+eIr ps+   ++r++lg++ tae Aa+a++aa ++l+g
  ONIVA06G08290.1  68 YKGVRMRS-WGSWVSEIRAPSQ---KTRIWLGSYSTAEAAARAYDAALLCLKG 116
                      9****998.**********964...6************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MAEATSKCQT RHTHTEQQQQ QHQTARHNER SLAFQAIKRF DMVKTAASNG AAAARRVGGG  60
GDGKRAAYKG VRMRSWGSWV SEIRAPSQKT RIWLGSYSTA EAAARAYDAA LLCLKGSAAA  120
DLNFPVRLPF DLPAAAMSPK SIQRVAAAAA ANANANASSS CSAAVFAGVD DSGGASASEA  180
STPACSSSDG AASPSPVSSP ETVISDVDVD YSLLADIEAF FQSPKCMEYA MMDPCSAFFA  240
PPPPPAMAME EECGWEEEGD IALWSFSSLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G44830.11e-23ERF family protein