PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G08220.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family GeBP
Protein Properties Length: 297aa    MW: 31677.7 Da    PI: 10.9036
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G08220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57345.52.2e-1497184698
           DUF573   6 lwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                      +w++ De++lL + + f+a++g  p   d+ a++e +++sis+++ +  +  K++r K Kf +   +       + +++hd+ +  ls  +Wgs
  ONIVA06G08220.1  97 VWNDADEVALLTAAVAFRARNGFAPRLpDMGALFESLRGSISSHIDQAKVYYKLKRNKSKFLHAPPQ------ATTTTPHDRRVRALSAELWGS 184
                      8**********************98877**********************************99998......8899***************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MSSSRRPPAR AAATEAAADA GLPLHPSSPR SKKHSSSSRR AAAGDRRPAA RAPNPSLSPR  60
GGGGGAPSRK SERRRRPRSL ALAVHGHAST SGGPGLVWND ADEVALLTAA VAFRARNGFA  120
PRLPDMGALF ESLRGSISSH IDQAKVYYKL KRNKSKFLHA PPQATTTTPH DRRVRALSAE  180
LWGSELAPPA VEGDADAAEA ADERDAEEGY IGGNLHVSVR LPVVSEVLGD YWRKNGRVLS  240
GVSLERGLAL VGPEEGRMAE AKWKRQLEVE TQTQGRRHDL AKEVCAMLID AVRGLGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00250.13e-10GeBP family protein