PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G08130.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HD-ZIP
Protein Properties Length: 759aa    MW: 82306.5 Da    PI: 6.6141
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G08130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.57e-211671156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
         Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                     r++ +++t+ q+++Le++F+++++p++++r++L+++lgL+ rq+k+WFqNrR+++k
  ONIVA06G08130.1 16 RKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMK 71
                     688899***********************************************998 PP
2START141.11.1e-442074622206
                      HHHHHHHHHHHHHHHC-TT-EEEE..........EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S.. CS
            START   2 laeeaaqelvkkalaeepgWvkss..........esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla.. 77 
                      +a +a++el+++a+a++  W+ks+          e +n d++ ++f++ ++       ++e +r+sg+v m ++ l   ++d++ +W e ++  
  ONIVA06G08130.1 207 MATRAMDELIRLAQAGDHIWSKSPgggvsggdarETLNVDTYDSIFSKPGGsyrapsINVEGSRESGLVLMSAVALADVFMDTN-KWMEFFPsi 299
                      57899****************************999**********887779****99****************9999999999.********* PP

                      ..EEEEEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCE.. CS
            START  78 ..kaetlevissg.....galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksngh.. 161
                        ka t++v+ +g     + l lm+ el  ++p+vp R++ fvRy+rq ++g w+i+dvSvd +++    ++  R+++lpSg+li +++ng+  
  ONIVA06G08130.1 300 vsKAHTIDVLVNGmggrsESLILMYEELHIMTPAVPtREVNFVRYCRQIEQGLWAIADVSVDLQRDAHFGAPPPRSRRLPSGCLIADMANGYsk 393
                      ******************************************************************98899*********************** PP

                      .......................EEEEEEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
            START 162 .......................skvtwvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                                              +vtwvehv++++++p   l+r lv sg+a+ga +w+a+lqr ce+
  ONIVA06G08130.1 394 vyamdnvphamvfwfrladdvahARVTWVEHVEVEEKSPiNVLYRDLVLSGAAFGAHRWLAALQRACER 462
                      ***************************************999*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 759 aa     Download sequence    
MDFGDEPEGS DSQRRRKRYH RHTPRQIQQL EAMFKECPHP DENQRAQLSR ELGLEPRQIK  60
FWFQNRRTQM KAQHERADNC FLRAENDKIR CENIAIREAL KNVICPTCGG PPVGEDYFDE  120
QKLRMENARL KEELDRVSNL TSKYLGRPFT QLPPATPPMT VSSLDLSVGG MGGPSLDLDL  180
LSGGSSGIPF QLPAPVSDME RPMMAEMATR AMDELIRLAQ AGDHIWSKSP GGGVSGGDAR  240
ETLNVDTYDS IFSKPGGSYR APSINVEGSR ESGLVLMSAV ALADVFMDTN KWMEFFPSIV  300
SKAHTIDVLV NGMGGRSESL ILMYEELHIM TPAVPTREVN FVRYCRQIEQ GLWAIADVSV  360
DLQRDAHFGA PPPRSRRLPS GCLIADMANG YSKVYAMDNV PHAMVFWFRL ADDVAHARVT  420
WVEHVEVEEK SPINVLYRDL VLSGAAFGAH RWLAALQRAC ERYASLVALG VPHHIAGVTP  480
EGKRSMMKLS QRMVNSFCSS LGASQMHQWT TLSGSNEVSV RVTMHRSTDP GQPNGVVLSA  540
ATSIWLPVPC DHVFAFVRDE NSRSQVSHPL SPPLMSLTHS LCPPLLLLQW DVLSHGNQVQ  600
EVSRIPNGSN PGNCISLLRG LNASQNSMLI LQESCTDASG SLVVYSPIDI PAANVVMSGE  660
DPSSIPLLPS GFTILPDGRP GSAAGASTSS AGPLAAARGG GGGGAGGGSV VTVAFQILVS  720
SLPSSKLNAE SVATVNGLIT TTVEQIKAAL NCSAHGHHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein