PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G07160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ARF | ||||||||
Protein Properties | Length: 1055aa MW: 116849 Da PI: 6.5963 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 72.4 | 5.4e-23 | 127 | 228 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+lt sd++++g +++p++ ae++ ++++++ +l+ +d++ sW++++iyr++++r++lt+GW+ Fv+ ++L +gD+v+F ++ ONIVA06G07160.1 127 FCKTLTASDTSTHGGFSVPRRAAEKIfppldftMQPPAQ--ELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFI--RD 216 99*****************************96555444..8************************************************..45 PP SEE..EEEEE-S CS B3 88 sefelvvkvfrk 99 ++ +l+++++r+ ONIVA06G07160.1 217 EKSQLLLGIRRA 228 677789999997 PP | |||||||
2 | Auxin_resp | 122.9 | 2.3e-40 | 253 | 335 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F+++YnPras+seFv++++k++kal+++vs+GmRf+m feteds rr++Gt++g+ dldpvrW+nS+Wr+L+ ONIVA06G07160.1 253 AAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQ 335 79*******************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1055 aa Download sequence |
MKDQGSSGVS PAPGEGEKKA INSELWHACA GPLVSLPPVG SLVVYFPQGH SEQVAASMHK 60 ELDNIPGYPS LPSKLICKLL SLTLHADSET DEVYAQMTLQ PVNKYDRDAM LASELGLKQN 120 KQPAEFFCKT LTASDTSTHG GFSVPRRAAE KIFPPLDFTM QPPAQELIAK DLHDISWKFR 180 HIYRGQPKRH LLTTGWSVFV STKRLLAGDS VLFIRDEKSQ LLLGIRRATR PQPALSSSVL 240 SSDSMHIGIL AAAAHAAANS SPFTIFYNPR ASPSEFVIPL AKYNKALYTQ VSLGMRFRML 300 FETEDSGVRR YMGTITGIGD LDPVRWKNSH WRNLQVGWDE STASERRTRV SIWEIEPVAT 360 PFYICPPPFF RPKLPKQPGM PDDENEVESA FKRAMPWLAD DFALKDVQSA LFPGLSLVQW 420 MAMQQNPQML TAASQTVQSP YLNSNALAMQ DVMGSSNEDP TKRLNTQAQN MVLPNLQVGS 480 KVDHPVMSQH QQQPHQLSQQ QQVQPSQQSS VVLQQHQAQL LQQNAIHLQQ QQEHLQRQQS 540 QPAQQLKAAS SLHSVEQHKL KEQTSGGQVA SQAQMLNQIF PPSSSQLQQL GLPKSPTHRQ 600 GLTGLPIAGS LQQPTLTQTS QVQQAAEYQQ ALLQSQQQQQ QLQLQQLSQP EVQLQLLQKI 660 QQQNMLSQLN PQHQSQLIQQ LSQKSQEILQ QQILQHQFGG SDSIGQLKQS PSQQAPLNHM 720 TGSLTPQQLV RSHSALAESG DPSSSTAPSA SRISPINSLS RANQGSRNLT DMVATPQIDN 780 LLQEIQSKPD NRIKNDIQSK ETVPIHNRHP VSDQLDASSA TSFCLDESPR EGFSFPPVCL 840 DNNVQVDPRD NFLIAENVDA MMPDALLSRG MASGKGMCTL TSGQRDHRDV ENELSSAAFS 900 SQSFGVPDMS FKPGCSSDVA VTDAGMPSQG LWNNQTQRMR TFTKVQKRGS VGRSIDITRY 960 RDYDELRHDL ACMFGIQGQL EDPYRMDWKL VYVDHENDIL LVGDDPWEEF VGCVKSIKIL 1020 SAAEVQQMSL DGDLGGVPPQ TQACSASDDA NAWRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19220.1 | 0.0 | ARF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G07160.1 |