PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G06990.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 362aa MW: 39705.3 Da PI: 4.4801 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4.1e-19 | 114 | 163 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ +g+W+AeIrdp++ r++lg+f ++eeAa+a++a +++++g ONIVA06G06990.1 114 QFRGIRQRP-WGKWAAEIRDPCK---GVRVWLGTFNSPEEAARAYDAEARRIRG 163 69*******.**********854...3************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 362 aa Download sequence |
MCGGAILSDL IPPPRRVTAG DLWLEKTKKQ QQQKKKNKGA RRLPLRQEEE DDFEADFEEF 60 EVDSGEWEVE SDADEAKPLA APRSGFAKGG LKNTTVAGAD GPAARSAKRK RKNQFRGIRQ 120 RPWGKWAAEI RDPCKGVRVW LGTFNSPEEA ARAYDAEARR IRGKKAKVNF PDGAPVASQR 180 SHAEPSSMNM PAFSIEEKPA VMSAGNKIMY NTNAYAYPAV EYTLQEPFVQ IQNVSFVPAM 240 NAIEDTFVNL SSDQGSNSFG CSDFSQENDI KTPDITSMLA PTITGVDDSA FLQNNASDAM 300 VPPVMGNASI DLADLEPYMK FLIDGGSDES IDTLLSSDGS QDVASSMDLW SFDDMPVSAE 360 FY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G14230.2 | 3e-38 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G06990.1 |