PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G06080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | ERF | ||||||||
Protein Properties | Length: 178aa MW: 19168.3 Da PI: 6.0005 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.2 | 9.8e-19 | 7 | 56 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a++ + g ONIVA06G06080.1 7 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARIMCG 56 69******9.**********8.....334**********************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MARPQQRYRG VRQRHWGSWV SEIRHPLLKT RIWLGTFETA EDAARAYDEA ARIMCGPRVR 60 TNFPHDVADE AAPPPPPHSA AAASSSFLSA ALVAKLHRFN LASVQAAQRG NSNDDDSTTS 120 SSAAASSRAV IPSLPAAAGA LGNAAATAEW SGGFLEEQYV DQMIEELLDS NFSMEISC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25190.1 | 2e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G06080.1 |