PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G06040.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

MYB_related

Protein Properties

Length: 424aa MW: 45036.9 Da PI: 5.5608

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G06040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30	1.2e-09	375	422	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +W + E+e l ++v+q+G+g+Wk I + gR + ++k++w++ ONIVA06G06040.1 375 KWCALEEETLRKGVEQYGNGNWKDILTNNPdvfIGRKAMDLKDKWRNM 422 68888**************************99*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MPRLMPEDAS LLLDHVVGDP SVPAAAANAA LAALPFPSRP TPRLLRASLL RRLAADPVSA 60 AALDSLQLLA SLPSSPSPAA PAAAAAAHLA VAAYLAVSAP DFDAAAGALF GRPGGRARRA 120 VEEGGAAALA SDEADAVADQ FEAAVGNSFS QTVLRGLWGD RAAAEERVRE LLAVEWAAIG 180 QSRLEMAAER IVGDGAIETW RAADEVTRAK YRLLAGEQRA REIEGKLGET IPQGNQISTP 240 EVHKVMDALK SSCANLHSVV EDPLPAAKAA ADEVLAARMD KAVDLNAGEV SNQPTACDIA 300 GPSAPADNLD APRKGTAASL MDWNPTARTF QWEDSPDPDG SCSPIHRPQL PSPRRTTFSP 360 LQPADNKAKR RKARKWCALE EETLRKGVEQ YGNGNWKDIL TNNPDVFIGR KAMDLKDKWR 420 NMMR

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MPRLMPEDAS LLLDHVVGDP SVPAAAANAA LAALPFPSRP TPRLLRASLL RRLAADPVSA  60
AALDSLQLLA SLPSSPSPAA PAAAAAAHLA VAAYLAVSAP DFDAAAGALF GRPGGRARRA  120
VEEGGAAALA SDEADAVADQ FEAAVGNSFS QTVLRGLWGD RAAAEERVRE LLAVEWAAIG  180
QSRLEMAAER IVGDGAIETW RAADEVTRAK YRLLAGEQRA REIEGKLGET IPQGNQISTP  240
EVHKVMDALK SSCANLHSVV EDPLPAAKAA ADEVLAARMD KAVDLNAGEV SNQPTACDIA  300
GPSAPADNLD APRKGTAASL MDWNPTARTF QWEDSPDPDG SCSPIHRPQL PSPRRTTFSP  360
LQPADNKAKR RKARKWCALE EETLRKGVEQ YGNGNWKDIL TNNPDVFIGR KAMDLKDKWR  420
NMMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	8e-12	MYB_related family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G06040.1