PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G05110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | E2F/DP | ||||||||
Protein Properties | Length: 419aa MW: 46239.4 Da PI: 9.517 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 72.9 | 3.6e-23 | 54 | 119 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f++l+++ + + + l+++a++L v +rRRiYDi+NVLe+++++ +k+kn+++w+g ONIVA06G05110.1 54 RKQKSLGLLCSNFVALYNRDDVESIGLDDAARRL---GV--ERRRIYDIVNVLESVGILVRKAKNRYSWIG 119 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 75.9 | 4.1e-24 | 177 | 257 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ + e ++++l+e+ak L+ e ++++k+RR+YDi+NVL++ln i+k ++k+++rw g ONIVA06G05110.1 177 RKEKSLGLLTQNFVKLFLTMEVDTISLDEAAKLLLGEghaenSMRTKVRRLYDIANVLSSLNFIDKiqqadSRKPAFRWLG 257 79********************************************************************99*******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence |
MATAAVMAAV PSSSPADAAE AVVMTEAVPS LPQRQQPVFV EGRGGKLRDH AYSRKQKSLG 60 LLCSNFVALY NRDDVESIGL DDAARRLGVE RRRIYDIVNV LESVGILVRK AKNRYSWIGF 120 GGVPMALREL KMSDDEDEDK MGDADGDTES EKLSQPVDNP SDNKPGAPRC RLRSDHRKEK 180 SLGLLTQNFV KLFLTMEVDT ISLDEAAKLL LGEGHAENSM RTKVRRLYDI ANVLSSLNFI 240 DKIQQADSRK PAFRWLGSAG KPKAENGVTI AVPPPGKTIS NKRAFGTELT NIDINRSRLD 300 STIPKKAKLT QSGGEILKNC KLSVQKQLGQ GSKGGFVYGP FHPAGARKQE LDNGNKGHTD 360 NVQNWESLAA SFRPQYQNQA LGDLFAHYVE AWKSWYSEFA QGSSMMQQHF GMPVINQFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-102 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G05110.1 |