PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G04660.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 386aa MW: 43416.1 Da PI: 8.3742

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G04660.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.5	5.2e-53	16	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrFhPtdeelv +yL++k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s ONIVA06G04660.1 16 MLPGFRFHPTDEELVRFYLRRKIQQKSLPI-ELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYS 108 579*************************.89***********9888999*********************************** PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +glkk+Lvfykgra kg+ktdW+mhe+rl ONIVA06G04660.1 109 SdGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 143 966677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MDEMRSSDIE KQDEVMLPGF RFHPTDEELV RFYLRRKIQQ KSLPIELIRQ LDIYKYDPWD 60 LPKLASTGEK EWYFYCPRDR KYRNSTRPNR VTGAGFWKAT GTDRPIYSSD GSKCIGLKKS 120 LVFYKGRAAK GVKTDWMMHE FRLPSLTDPS LPQKKPLEKI IPPNDSWAIC RIFKKTNSTA 180 QRALSHSWVS PPLSSTNEAY TAPVSQTTQR SQHISDNTSS VMTDAISSTI QFTGSSYLPS 240 TVPSCHNPLS MIDSNSRPDA SVPLSSPVAE HQTMGILSAI PLDITAGIDI ASMVFNASSF 300 TLPNMDRMTA NIEFGQPQKC NSSSSMTNRC VVDMPDVANN INSGPRSINF NLQGTLSDDW 360 RMTLPWESLP CTTEVSTNFQ STKCYT

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MDEMRSSDIE KQDEVMLPGF RFHPTDEELV RFYLRRKIQQ KSLPIELIRQ LDIYKYDPWD  60
LPKLASTGEK EWYFYCPRDR KYRNSTRPNR VTGAGFWKAT GTDRPIYSSD GSKCIGLKKS  120
LVFYKGRAAK GVKTDWMMHE FRLPSLTDPS LPQKKPLEKI IPPNDSWAIC RIFKKTNSTA  180
QRALSHSWVS PPLSSTNEAY TAPVSQTTQR SQHISDNTSS VMTDAISSTI QFTGSSYLPS  240
TVPSCHNPLS MIDSNSRPDA SVPLSSPVAE HQTMGILSAI PLDITAGIDI ASMVFNASSF  300
TLPNMDRMTA NIEFGQPQKC NSSSSMTNRC VVDMPDVANN INSGPRSINF NLQGTLSDDW  360
RMTLPWESLP CTTEVSTNFQ STKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G04660.1