PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA06G03340.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 235aa MW: 25698.2 Da PI: 7.7663 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.5 | 2e-10 | 54 | 91 | 5 | 44 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 T+eEd +++ a++ +G++ + Ia+ + gRt++ +k+++ ONIVA06G03340.1 54 TEEEDRIIIAAHAIHGNK-RACIAKLLD-GRTDNAIKNHL 91 9*****************.*********.**********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MGEGDAGQES YHAMSKSRPP DQYWMDGQDL CRKPAWKSAT RAKSPPIDFE AHETEEEDRI 60 IIAAHAIHGN KRACIAKLLD GRTDNAIKNH LEFYSEAALR AKEELAGDEL HLSVVIVPAI 120 PALGSGCARS SVIHVISTDA RERRRFGRWA ISSARLPVEW IPSSERSPSL VSATALSSSA 180 FAFAAALHVL PPPLRPSLAV IAIDRTTIYE DAGRRRTLHL HHAATPSPHL TPSLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55730.1 | 4e-13 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA06G03340.1 |