PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G01190.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family HSF
Protein Properties Length: 442aa    MW: 49004.8 Da    PI: 4.9743
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G01190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind103.42e-32511422103
                      HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
     HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 
                      Fl+k+y++++d++++++isw e g sfv++d++ f++  L+++Fkhsnf+SF+RQLn+YgF+kv+ ++         we++++ F  g+k+ll+
  ONIVA06G01190.1  51 FLTKVYDMVSDPATDNVISWAEGGGSFVIWDSHAFER-DLHRHFKHSNFTSFIRQLNTYGFRKVHPDR---------WEWANEGFIMGQKHLLK 134
                      9************************************.8**************************999.........***************** PP

                      XXXXXXXX CS
     HSF_DNA-bind  96 kikrkkse 103
                      +ikr+k++
  ONIVA06G01190.1 135 TIKRRKKS 142
                      *****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MGSKKRSPQH PAAAAPPPAV GGGGGGEVSG DGGASTANGP VVPKPSEVAP FLTKVYDMVS  60
DPATDNVISW AEGGGSFVIW DSHAFERDLH RHFKHSNFTS FIRQLNTYGF RKVHPDRWEW  120
ANEGFIMGQK HLLKTIKRRK KSSQEAPSEI QKAPVKTAPG TENIEIGKYG GLEKEVETLK  180
RDKALLMQQL VDLRHYQQTS NLEVQNLIER LQVMEQNQQQ MMALLAIVVQ NPSFLNQLVQ  240
QQQQQRRSNW WSPDGSKKRR FHALEQGPVT DQETSGRGAH IVEYLPPVPE TSGQVNPVEG  300
AICSANSQPV PSPAVATPMD MQTSNVADTL GSSEEPFADN STLHEWDDND MQLLFDDNLD  360
PILPPFENDG QMGPPLSVQD YDFPQLEQDC LMEAQYNSNN PQYVLLYMPD IFPFSSADFF  420
GDQPPGASAP LASRNGVLRV YR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133139LKTIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16820.21e-71HSF family protein