PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G00900.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 887aa MW: 99230.9 Da PI: 5.0466

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G00900.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61.2	3.3e-19	70	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 lp+G++F+Ptd++l+ +L+++v + + + +e+ik+vd +++P+d+p ++++ yfF+k+ k+ a++ +++ ++ W+ ONIVA06G00900.1 70 LPRGVEFNPTDSDLL-WHLAAEVGNGQarrhpfI--NEFIKSVDetigFGYTHPQDIP-GIRQDGCASYFFHKNFKECANE--NSKCIR---WQ 154 699**********.789999988886776442..233554443333899***.666777789**9999864..444445... PP NAM 85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 ++g+ +++ +g+l g+k+++v+y + + ++++ tdW +h+y++ ONIVA06G00900.1 155 KSGNPISITL-DGNLQGCKEVFVLYayETDGNNPQITDWRLHQYHI 199 ********.999******97767888889*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 887 aa Download sequence
MAKDKEVGPP PPPCVDSDHE DLPLAERRRR LLRPPAESKP PAPERREASA AAAAAAEDSG 60 GAAQQGWPGL PRGVEFNPTD SDLLWHLAAE VGNGQARRHP FINEFIKSVD ETIGFGYTHP 120 QDIPGIRQDG CASYFFHKNF KECANENSKC IRWQKSGNPI SITLDGNLQG CKEVFVLYAY 180 ETDGNNPQIT DWRLHQYHIE STEKDEGELV VSKIFYELEK NQFKWAEKSH AQSAQGASAI 240 DDDSKEELQL DNHSFNMITE NSSVQGNENK QKQTQTGTCP NLDKLSYFNV VSNMHIGNQI 300 NDHDEIEELD HMSLQERYRI LMAENHSSSA VVSSEQCAID GLENSCKPGT NGMIPKRIHE 360 GTAFRDGMYS MLQEISSAPA IIGSIDNDNN RRLLTEGLSN NQQSHEAGCE SGFLSTSSSA 420 APPQCQVVCS HDLLVNGKTL IYSRDPSSSS TPTFGDKNIQ LEGTDDRTLL VDVKLEPALE 480 GDFTEKITSS VQRTDPNHGT EGSNLVGSIN SVSSAISKRI SEAARSNPEN SHVEGLLPSS 540 RIKSEVTGSE LPLVVCGLTS ISIAELTAKK TNTLNHDGVL AYCSRKRKRR KTLRDPSEKT 600 LEEDSLRNDE GTAYFSRQRR RRKTATDSIE TALEEDAPGL LQILLDKGIL VKEIKLYGVE 660 EEDDMVPDCT ESDFQDLENV ITKLFPQRTS LLKSALRHEK GEKAIYCLTC LISLIEQSRY 720 LQFRDCPVEW GWCRDLQSFI FIFKSHNRIV LERPEYGYAT YFFEIVKSLP IQWQIQRMVT 780 AMKLSGCGRT ALIENRPLLI GEDLTEGEAR VLEEYGWVPN SGLGTMLNYR DRVVHDRWNE 840 RSGTDWKTKI GKLLMNGYSE GHLVLSHFPT KVGKIEDDTE IKQEDPL

Sequence ? help Back to Top

Protein Sequence Length: 887 aa Download sequence

MAKDKEVGPP PPPCVDSDHE DLPLAERRRR LLRPPAESKP PAPERREASA AAAAAAEDSG  60
GAAQQGWPGL PRGVEFNPTD SDLLWHLAAE VGNGQARRHP FINEFIKSVD ETIGFGYTHP  120
QDIPGIRQDG CASYFFHKNF KECANENSKC IRWQKSGNPI SITLDGNLQG CKEVFVLYAY  180
ETDGNNPQIT DWRLHQYHIE STEKDEGELV VSKIFYELEK NQFKWAEKSH AQSAQGASAI  240
DDDSKEELQL DNHSFNMITE NSSVQGNENK QKQTQTGTCP NLDKLSYFNV VSNMHIGNQI  300
NDHDEIEELD HMSLQERYRI LMAENHSSSA VVSSEQCAID GLENSCKPGT NGMIPKRIHE  360
GTAFRDGMYS MLQEISSAPA IIGSIDNDNN RRLLTEGLSN NQQSHEAGCE SGFLSTSSSA  420
APPQCQVVCS HDLLVNGKTL IYSRDPSSSS TPTFGDKNIQ LEGTDDRTLL VDVKLEPALE  480
GDFTEKITSS VQRTDPNHGT EGSNLVGSIN SVSSAISKRI SEAARSNPEN SHVEGLLPSS  540
RIKSEVTGSE LPLVVCGLTS ISIAELTAKK TNTLNHDGVL AYCSRKRKRR KTLRDPSEKT  600
LEEDSLRNDE GTAYFSRQRR RRKTATDSIE TALEEDAPGL LQILLDKGIL VKEIKLYGVE  660
EEDDMVPDCT ESDFQDLENV ITKLFPQRTS LLKSALRHEK GEKAIYCLTC LISLIEQSRY  720
LQFRDCPVEW GWCRDLQSFI FIFKSHNRIV LERPEYGYAT YFFEIVKSLP IQWQIQRMVT  780
AMKLSGCGRT ALIENRPLLI GEDLTEGEAR VLEEYGWVPN SGLGTMLNYR DRVVHDRWNE  840
RSGTDWKTKI GKLLMNGYSE GHLVLSHFPT KVGKIEDDTE IKQEDPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	585	590	RKRKRR
2	585	591	RKRKRRK
3	586	591	KRKRRK
4	607	620	RNDEGTAYFSRQRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14490.1	9e-40	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G00900.1