PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G00780.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

G2-like

Protein Properties

Length: 260aa MW: 28613.1 Da PI: 10.787

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G00780.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.9	2e-32	175	228	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ ONIVA06G00780.1 175 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 228 9****************************************************7 PP
2	Myb_DNA-binding	49.4	1.1e-15	176	227	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ ONIVA06G00780.1 176 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 227 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MSKKLDLSLH ISTPSCFSPS PAAASTTASS WPWTTKQQLP EEEEAAATTS TTTSSRSAPP 60 LLLCNSDVFS TRGSSTTNTN HHADGGLANS QQLKAAARQP IHGIPVYHGH QQQQRRQLHH 120 PYDVVGTRQS DGGRRLFSHH VGVGVTPSRT LSSSSSSPAR LLPRLPPGRR SVRAPRMRWT 180 TTLHARFVHA VELLGGHERA TPKSVLELMD VKDLTLAHVK SHLQMYRTIK NTDRPVSNAE 240 YKTERGLRDI YVEVTRSAEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-36	G2-like family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G00780.1