PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA06G00080.3
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family NAC
Protein Properties Length: 690aa    MW: 76946.9 Da    PI: 6.8698
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA06G00080.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.59.3e-48181481128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      lp+GfrF+Ptdeelv +yLk k++g++++    i++vd+ ++ePwdLp +  +k+++ ew+fF++rd+ky+ g+r+nr+t++gyWkatgkd+ +
  ONIVA06G00080.3  18 LPVGFRFRPTDEELVRHYLKGKIAGRSHPDLLLIPDVDLSTCEPWDLPaMsVIKSDDPEWFFFAPRDRKYPGGHRSNRSTAAGYWKATGKDRLI 111
                      79*************************999889***************5347777888************************************ PP

              NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       s+  g l+g+kktLvf++grap+g +t W+mheyr 
  ONIVA06G00080.3 112 RSRpAGPLIGIKKTLVFHRGRAPRGLRTAWIMHEYRT 148
                      **988889***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 690 aa     Download sequence    
MKQGKVEMTP AVAAAAVLPV GFRFRPTDEE LVRHYLKGKI AGRSHPDLLL IPDVDLSTCE  60
PWDLPAMSVI KSDDPEWFFF APRDRKYPGG HRSNRSTAAG YWKATGKDRL IRSRPAGPLI  120
GIKKTLVFHR GRAPRGLRTA WIMHEYRTTE PHFQSGKNGS FVLYRLFNKH EQDDTHAPAS  180
NLDQQLSTSS QGNPQNGTPA VQPALASIMK DHQTLPSSGF SQLTEIQDAS TSVHDKEQTV  240
AHDDAFLDVL SQLPDLEPEQ RYNGFPNITS PIRPYSDHPF VGNLGEQDLS AHFGSTLSEQ  300
DLQSLLFSPN YTKMDKHPTG NVESNPTASS NNPNNNTLLM DSWRKNDSYQ MLLIQRADNT  360
DATCCSSSIN APQTETSDAN LEARAQSSSM VYSGVAEGSP LCNQDQLHSA FNPHMESQKS  420
GAFCWAGLWT PYPQHWFDTI VEPGRSGMTF SDALKEQGQE QAPSMKHLTA QDLVDPQQGT  480
AARRIRLVCS VERASVSQPV SSHLQSEYEA GSCCNTRNSS NNKKESVRSE DEAGSCCNTG  540
SSSNNHSEEN DDAASQIMVL LQMENQCIFS AKRIPLFKWI IQWKLWTSSK ASPFMLISFN  600
FPRAEEMLVH ANQPRGTNLK QRLLRVESRN SNENNVPSLE TREQQHAPHI QKWTSSVVRL  660
GWGWQWTALF VMAGSLLLLV GVWKSLNHTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.17e-65NAC family protein