PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA06G00080.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

NAC

Protein Properties

Length: 604aa MW: 67046.5 Da PI: 6.4084

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA06G00080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.8	7.5e-48	18	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lp+GfrF+Ptdeelv +yLk k++g++++ i++vd+ ++ePwdLp + +k+++ ew+fF++rd+ky+ g+r+nr+t++gyWkatgkd+ + ONIVA06G00080.1 18 LPVGFRFRPTDEELVRHYLKGKIAGRSHPDLLLIPDVDLSTCEPWDLPaMsVIKSDDPEWFFFAPRDRKYPGGHRSNRSTAAGYWKATGKDRLI 111 79***********************999889***********5347777888******************************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 s+ g l+g+kktLvf++grap+g +t W+mheyr ONIVA06G00080.1 112 RSRpAGPLIGIKKTLVFHRGRAPRGLRTAWIMHEYRT 148 988889***************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MKQGKVEMTP AVAAAAVLPV GFRFRPTDEE LVRHYLKGKI AGRSHPDLLL IPDVDLSTCE 60 PWDLPAMSVI KSDDPEWFFF APRDRKYPGG HRSNRSTAAG YWKATGKDRL IRSRPAGPLI 120 GIKKTLVFHR GRAPRGLRTA WIMHEYRTTE PHFQSGKNGS FVLYRLFNKH EQDDTHAPAS 180 NLDQQLSTSS QGNPQNGTPA VQPALASIMK DHQTLPSSGF SQLTEIQDAS TSVHDKEQTV 240 AHDDAFLDVL SQLPDLEPEQ RYNGFPNITS PIRPYSDHPF VGNLDNTDAT CCSSSINAPQ 300 TETSDANLEA RAQSSSMVYS GVAEGSPLCN QDQLHSAFNP HMESQKSGAF CWAGLWTPYP 360 QHWFDTIVEP GRSGMTFSDA LKEQGQEQAP SMKHLTAQDL VDPQQGTAAR RIRLVCSVER 420 ASVSQPVSSH LQSEYEAGSC CNTRNSSNNK KESVRSEDEA GSCCNTGSSS NNHSEENDDA 480 ASQIMDGEPM HIQCKEDTPI QVDHSVEVMD KLQGFSFHEE MLVHANQPRG TNLKQRLLRV 540 ESRNSNENNV PSLETREQQH APHIQKWTSS VVRLGWGWQW TALFVMAGSL LLLVGVWKSL 600 NHTT

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MKQGKVEMTP AVAAAAVLPV GFRFRPTDEE LVRHYLKGKI AGRSHPDLLL IPDVDLSTCE  60
PWDLPAMSVI KSDDPEWFFF APRDRKYPGG HRSNRSTAAG YWKATGKDRL IRSRPAGPLI  120
GIKKTLVFHR GRAPRGLRTA WIMHEYRTTE PHFQSGKNGS FVLYRLFNKH EQDDTHAPAS  180
NLDQQLSTSS QGNPQNGTPA VQPALASIMK DHQTLPSSGF SQLTEIQDAS TSVHDKEQTV  240
AHDDAFLDVL SQLPDLEPEQ RYNGFPNITS PIRPYSDHPF VGNLDNTDAT CCSSSINAPQ  300
TETSDANLEA RAQSSSMVYS GVAEGSPLCN QDQLHSAFNP HMESQKSGAF CWAGLWTPYP  360
QHWFDTIVEP GRSGMTFSDA LKEQGQEQAP SMKHLTAQDL VDPQQGTAAR RIRLVCSVER  420
ASVSQPVSSH LQSEYEAGSC CNTRNSSNNK KESVRSEDEA GSCCNTGSSS NNHSEENDDA  480
ASQIMDGEPM HIQCKEDTPI QVDHSVEVMD KLQGFSFHEE MLVHANQPRG TNLKQRLLRV  540
ESRNSNENNV PSLETREQQH APHIQKWTSS VVRLGWGWQW TALFVMAGSL LLLVGVWKSL  600
NHTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.3	1e-65	NAC family protein

Link Out ? help Back to Top
Ensembl	ONIVA06G00080.1