PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G29080.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 111aa MW: 12343.6 Da PI: 10.0299 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.3 | 3.5e-08 | 25 | 70 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 g WT+ +++ +a + + ++ +W+ Iar+mg +++ +++ ++ ONIVA05G29080.1 25 GGWTQRQNKQFECALAVYDKEtpdRWHNIARYMGGAKSADEVRRHF 70 56*****************99*************889*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MASAAGSKQQ QAMMSLPSSR GGGGGGWTQR QNKQFECALA VYDKETPDRW HNIARYMGGA 60 KSADEVRRHF DHLVEDVARI ESGRVPFPRY SSSSSSRGAD DGNRSRYLKY Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 6e-29 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G29080.1 |