PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G29070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | MYB_related | ||||||||
Protein Properties | Length: 90aa MW: 10469.9 Da PI: 10.0531 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.5 | 2.7e-07 | 8 | 54 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 W + +l+ +a + + ++ +W+ Iar +g g++++++k ++ + ONIVA05G29070.1 8 QWPQKQNKLFEQALAVYDKEtpdRWHNIARAVGGGKSAEDVKRYYEM 54 68888899**********99************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 90 aa Download sequence |
MAQQARAQWP QKQNKLFEQA LAVYDKETPD RWHNIARAVG GGKSAEDVKR YYEMLEEDIK 60 HIESGKKSNR TLLKCKYAAE YGVRPNRAMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 8e-26 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G29070.1 |