PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G28560.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 272aa    MW: 29579.2 Da    PI: 10.119
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G28560.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2612.7e-1997147256
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                       y+GVr++  +g+WvAeIr p +   r r++lg+++++e Aa a+++a+ kl+ge
  ONIVA05G28560.1  97 LYRGVRQRQ-WGKWVAEIRLPQN---RVRVWLGTYDSPETAAHAYDRAAFKLRGE 147
                      59****999.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MDASLRTLPP ASFPGEVRSA VSSLLLSPGG SALDTVFSHL PPPVTIPPLG SSVYYRQSEL  60
LRHFAASQAA QAQSATAAAS SSSAAAAGLD DGAPRKLYRG VRQRQWGKWV AEIRLPQNRV  120
RVWLGTYDSP ETAAHAYDRA AFKLRGEYAR LNFPGVMDGR DCPDNLRQLR DAVDAKIQAI  180
RVRMARKRAR ARRQREESKK SQRAEDAKAA TPSRPVASER AASETTTTTT TSSSYGSPDG  240
VLSMSAASVD GDCPLERMPS FDPELIWEML NF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185191ARKRARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.11e-32ERF family protein