PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G28480.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family WRKY
Protein Properties Length: 279aa    MW: 30102.7 Da    PI: 5.3619
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G28480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY825.9e-26107167158
                      ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                      ldDg +WrKYGqK++ g+++pr+Y+rCt++   gC+++k+v+r++ dp +++++Y g+H++
  ONIVA05G28480.1 107 LDDGLSWRKYGQKDILGAKYPRAYFRCTHRhtqGCNATKQVQRADGDPLLFDVVYLGDHTC 167
                      58***************************98999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MVELCGGEGE GQIMLATELA QLRAMARELE AKMDPDRVAA RELCRALASS VDRSIRLAAS  60
CFPPPEHPPP AAGNAGRDAA FKKRQVMGMA KVRRQVRVTS VQDTASLDDG LSWRKYGQKD  120
ILGAKYPRAY FRCTHRHTQG CNATKQVQRA DGDPLLFDVV YLGDHTCGQA AVAAAAQSAP  180
PEHAGQEQQR QSSLLAAGTE GIHQQVVAEP MAAPFLFTST AAGGVDDGYF SFISPANSDC  240
QFSSDFSAGS VGVDMDHEAR FEDLFSSTLE FFQSEIQNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.23e-33WRKY family protein