PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ONIVA05G27990.1

Organism

Oryza sativa f. spontanea

Taxonomic ID

4536

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

WRKY

Protein Properties

Length: 630aa MW: 65747.9 Da PI: 7.4265

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ONIVA05G27990.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.4e-30	368	426	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+ ONIVA05G27990.1 368 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTVLITTYEGNHNHP 426 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 630 aa Download sequence
MESYVGVKRK NVVVGGDVGR EMPVAPPSSS SAAVGMVEFP AAAAGLGYAG MTAKEAGGGY 60 QERRVVVGEM DFFKTAEKRG ERKEPPPATA TAAASGHAGA SPDDLSLNKD DLTINMGLLV 120 GRRRNSGSEE SIVDDGGVSS NDEEHREAKA ALAVTKAEIG RLSEENKRLK NMLSNVTTKY 180 NSLQMQFVTL MQQRRSVLAA PIHQQELLDP EKKEQEGSQQ QQQQQLIPRQ FISLGSASLQ 240 PDVEAPHSVV VVGGGGGGDV CAPSSSNPDA AVPAMMPLPH FDHHNHHHPI HGGRERGSSP 300 AEADHHRHRQ QEQPPPPQQQ QLLPPSWLPA DKVPRFLPGK GPEPIPEAAT MRKARVSVRA 360 RSDAPMISDG CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP VRKQVQRCAE DRTVLITTYE 420 GNHNHPLPPA AMAMASTTAA AASMLLSGSM PSADGSLMAG SNFLARAVLP CSSTVATISA 480 SAPFPTVTLD LTQTAPPPPP PASSTQPQPP RPEPAQLQAA LAEAARPVAL PQLFGQKLYD 540 QSKLSAVQAV AGTKGSDGGA LADTVNAATA AIASDPNFTA VLAAALTSYI GSSSGSGGGG 600 GGGSSGTVQP LMSGGGDSCS RDDKIGEQNS

Sequence ? help Back to Top

Protein Sequence Length: 630 aa Download sequence

MESYVGVKRK NVVVGGDVGR EMPVAPPSSS SAAVGMVEFP AAAAGLGYAG MTAKEAGGGY  60
QERRVVVGEM DFFKTAEKRG ERKEPPPATA TAAASGHAGA SPDDLSLNKD DLTINMGLLV  120
GRRRNSGSEE SIVDDGGVSS NDEEHREAKA ALAVTKAEIG RLSEENKRLK NMLSNVTTKY  180
NSLQMQFVTL MQQRRSVLAA PIHQQELLDP EKKEQEGSQQ QQQQQLIPRQ FISLGSASLQ  240
PDVEAPHSVV VVGGGGGGDV CAPSSSNPDA AVPAMMPLPH FDHHNHHHPI HGGRERGSSP  300
AEADHHRHRQ QEQPPPPQQQ QLLPPSWLPA DKVPRFLPGK GPEPIPEAAT MRKARVSVRA  360
RSDAPMISDG CQWRKYGQKM AKGNPCPRAY YRCTMAAGCP VRKQVQRCAE DRTVLITTYE  420
GNHNHPLPPA AMAMASTTAA AASMLLSGSM PSADGSLMAG SNFLARAVLP CSSTVATISA  480
SAPFPTVTLD LTQTAPPPPP PASSTQPQPP RPEPAQLQAA LAEAARPVAL PQLFGQKLYD  540
QSKLSAVQAV AGTKGSDGGA LADTVNAATA AIASDPNFTA VLAAALTSYI GSSSGSGGGG  600
GGGSSGTVQP LMSGGGDSCS RDDKIGEQNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	2e-70	WRKY family protein

Link Out ? help Back to Top
Ensembl	ONIVA05G27990.1