PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ONIVA05G27870.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 418aa MW: 43770.5 Da PI: 6.6777 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 105.3 | 3.3e-33 | 201 | 258 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt+++Cpvkk+vers +d vv++tYeg+H+h+ ONIVA05G27870.1 201 EDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCPVKKRVERSYQDAAVVITTYEGKHTHP 258 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MSGGGGGGEG FPFHDELASL FAERPPNGAM PGMLQQQQPW SFIDYHHHLM QESAPTTPPL 60 DYEAFAGEFD DDVAPLEEVK RELVVDGVGL FPGGGASAAA AAAAAAGPMT PNSMSVSSTS 120 SEACGVGGGA GGDEESAGKC KKEEEGDGGD DDGKEGSSTT KGDGDGEDKN KKGGKGKGKG 180 EKRPRQPRFA FMTKSEVDHL EDGYRWRKYG QKAVKNSPFP RSYYRCTTQK CPVKKRVERS 240 YQDAAVVITT YEGKHTHPIP ATLRGTAHLL GAAAAAHHHG GLQYHHPGHF AAAVGHRLPP 300 QPHDALGGGL LAPPHAQHLH AMQHQMQLAA AAASGGSLHA AAMQQMPQPD HAGLAAIIAS 360 TTGASTTPAP PPATGSAAAA ATPLRMQHFM AQDYGLLQDM FIPSPFLHND DANNNNHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 2e-43 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | ONIVA05G27870.1 |