PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G27810.1
Organism
Oryza sativa f. spontanea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ERF
Protein Properties Length: 282aa    MW: 30273.6 Da    PI: 8.2477
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G27810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-18125175356
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd +    r +r++lg+f ta+eAa a++ a+++++g+
  ONIVA05G27810.1 125 YRGVRRRP-WGKFAAEIRDTRR---RgARVWLGTFATADEAALAYDMAALRMRGH 175
                      9*******.**********433...24**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MAIGAAPASN QPHDTSNILE NVWASIMTSS SSPAVSSSVA VSSSAVTGQE ENSAILQRLP  60
SLGRWISMGA EEWDELLLSG AALASESSGE LQLVAASPGD HNQVVGGGGG ANYRTTATAA  120
ARRSYRGVRR RPWGKFAAEI RDTRRRGARV WLGTFATADE AALAYDMAAL RMRGHRAHLN  180
FPLATVQKHL ERDLAGGRSS SDQTSTRARR RRRPRANTTT DAAARSVVFS GVQTATNCDH  240
MVSFASEKDQ VSMQECSKSD AGVIDFEEIG GEYWDYLFPP LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.17e-12ERF family protein