PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ONIVA05G27700.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family ARF
Protein Properties Length: 635aa    MW: 69853.7 Da    PI: 7.0216
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ONIVA05G27700.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B378.28.8e-25142243199
                      EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                      f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F   + +
  ONIVA05G27700.3 142 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyS-QQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGD 232
                      99****************************963.3445679************************************************..348 PP

                      EE..EEEEE-S CS
               B3  89 efelvvkvfrk 99 
                      ++el+++v+r+
  ONIVA05G27700.3 233 DGELRLGVRRA 243
                      9999***9996 PP

2Auxin_resp112.93.1e-37268348182
       Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                      +aha++t+svF+++YnPr s+seF+v+++k++k+l++++svG Rfkm++e+ed+serr++G+++g  d+dp  W++SkW++L
  ONIVA05G27700.3 268 VAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASERRYTGIITGSGDTDP-MWHGSKWKCL 348
                      79*********************************************************************.9********9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 635 aa     Download sequence    
MTGIDLNTVE EDEEEAAEEV AANGSSPAPA RAGAVCLELW HACAGPVAPL PRKGGVVVYL  60
PQGHLEHLGD APAAAAAAAA VPPHVFCRVV DVTLLADAAT DEVYAQLSLV PEKEEVARRA  120
DDGEGEDGDG MKQRFARMPH MFCKTLTASD TSTHGGFSVP RRAAEDCFPP LDYSQQRPSQ  180
ELVAKDLHGT EWRFRHIYRG QPRRHLLTTG WSAFVNKKKL VSGDAVLFLR GDDGELRLGV  240
RRAAQLKNGS AFPALYNQCS NLGTLANVAH AVATESVFNI YYNPRLSQSE FIVPYWKFMK  300
SLSQPFSVGL RFKMRYESED ASERRYTGII TGSGDTDPMW HGSKWKCLLV RWDDDAEFRR  360
PNRVSPWEIE LTSSVSGSHL STPHSKRLKP CLPHVNPEYM VPRGGGCPDF AESAQFHKVL  420
QGQELFRPYR GTLVDASMGS NGFHQQDSPR APGVVNKWQA QLHGRAAFHG PPALALPSQS  480
SSPPSVLMFQ QANSKMPRLE FGHGQLDKHE NDRRVRFGPS EGIERREQRI PLQPYPTSGE  540
VIDGQVTVEK SHSPGRHGKD GPDNKAVGTN SCKIFGISLT EKVPAREELD DGDANYSLQS  600
LKQVPKSLGN SCATVHEQRP VVGRVIDIST MDMMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33860.11e-163ARF family protein